| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2603 |
|---|
| Symbol | |
|---|
| ID | 8226175 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 3211135 |
|---|
| End bp | 3212628 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644930434 |
|---|
| Product | RagB/SusD domain protein |
|---|
| Protein accession | YP_003086985 |
|---|
| Protein GI | 255036364 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGC TACTGAAATT AACCACATAC CTGGGCATGG CCGGCACCGC GCTGATCGCC
CCCTCGTGCC AGCTGGATGA AACGATTTAT TCGTCTATCT ACACGGAAGC ATTCTATAAA
ACCGCCGCGG ATGCGGAAAA AGGGCTGATC TCCGTTTACG GCGCATTGGG CAGCCTGGGC
GGCGGTCCCG CGTTGACGCT CGTCGGCGAT TTCAGCGACG ACCAGACCTA CCCGCGCGCC
GTGGTGGGCC GCAACACGCT CACGCAGTTT ACCTACGACG TGAACTACAC CACCCAGAAA
AGTAATTCCC GCCTCAACGA ATCGCCGCAG CAGATTTGGC AATCGTGCTA CAACGGCATC
GAAAAAGCGA ACTGGGTGAT TGCCAAGGTG CCGGATGCCA ACATGGACGA GACGCGCAAG
AAGCAGATCA TTGGTGAAGC GTACTTCCTG CGGGCGTTTT ACCATTGGTT TTTGAGTAAA
AATTTCGGGG ACATCCCGGT TAAAATCACC CCAAGCTACA CCGAAGCCGA AGCGTCGACA
GCCAAAAGCC CCAAAGCGGA CGTGTACAAA CAAATTTACG CCGACCTCGA TCAGGCTTTG
AATGCCGGGC TCGTGTCGTA CCCCAATGTG GAGAAAGGCC GCGTTGCTAA GGAAGTGGTG
AATGCATTGT ATGCCAAAGC TGCCCTGTAT AATGAAGACT GGGCCAAAGC GCTGGAACAA
GCCAAGGTGG TCATCAACTC AGGCAAATAT GTGCTCATGA CTGATGTGCG CGACGTTTAC
AAATATGACC AGGAAGATGT TGCACGCATT GAAAACATGT GGGCATACGA GGCAGACCCT
GTGTCGCCGG GCCTCGGCCA CCAGCTGACG GGCCTCTGCG GTCCTTCGGG AAGTGCCGGC
GCGGAATATG CCCGTACCTC GTATGGCTCG ATGTTCGCCT ACCAGGCATT CTTCGATTCG
TTCGACCCGG CCGACAAACG CCGGACTTTG CTGGACACCA CCTACATCGA CAAAGCCGGC
AAAGTGGTTC CGCAGCGAAG CATCACGCCC ATCACGACAA AGGGTGTGCT CATTAAAAAG
TATCAGGACC CTGTTTCGAC TGTGGGACTG ATCCCGAACA TCCCGATCTT CCGCCTGCCC
GACATGTACC TCATCGCCGC CGAAGCGGAA GCCCGCCTGA ACGGCGCCAC GTCGGCCGCG
TACGGTTTCG TGAATCCAGT GCGGAAGCGT GCAGGCCTTC CGGAACTAAA AACCGGCCTC
ACCAAGGACG CATTCATCGA GGCAGTATTG CAAGAGCGCG CCTGGGAGTT TTTCGCAGAA
GGCGACCGCT GGTATGACCT TACCCGCACC GGCAAATTCC TGACCGTGAT CCCGAAAGCG
GTAAACGACG TGTACCCGAC CCGCAACGTT ACCGCCAAAA ACAGGTATTT CCCCATCCCG
CTGGATGAAA TCATCGCCAA TACGAAGCTG GAACAGAATC CTGACTGGAA ATAA
|
|---|
| Protein sequence | MKKLLKLTTY LGMAGTALIA PSCQLDETIY SSIYTEAFYK TAADAEKGLI SVYGALGSLG
GGPALTLVGD FSDDQTYPRA VVGRNTLTQF TYDVNYTTQK SNSRLNESPQ QIWQSCYNGI
EKANWVIAKV PDANMDETRK KQIIGEAYFL RAFYHWFLSK NFGDIPVKIT PSYTEAEAST
AKSPKADVYK QIYADLDQAL NAGLVSYPNV EKGRVAKEVV NALYAKAALY NEDWAKALEQ
AKVVINSGKY VLMTDVRDVY KYDQEDVARI ENMWAYEADP VSPGLGHQLT GLCGPSGSAG
AEYARTSYGS MFAYQAFFDS FDPADKRRTL LDTTYIDKAG KVVPQRSITP ITTKGVLIKK
YQDPVSTVGL IPNIPIFRLP DMYLIAAEAE ARLNGATSAA YGFVNPVRKR AGLPELKTGL
TKDAFIEAVL QERAWEFFAE GDRWYDLTRT GKFLTVIPKA VNDVYPTRNV TAKNRYFPIP
LDEIIANTKL EQNPDWK
|
|---|
| |