Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2596 |
Symbol | |
ID | 8226168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 3202219 |
End bp | 3203682 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644930427 |
Product | coagulation factor 5/8 type domain protein |
Protein accession | YP_003086978 |
Protein GI | 255036357 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3669] Alpha-L-fucosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAAC AAATAACCGG TCTCCTCTGC CTGACAGCGT CGATCGCCTT TGCCCAAACA CCCCCGAAAC CTTACGGTGC CCTGCCGGCG CCGCGCCAGC TCGCGTGGCA CGAGACCGAA GTGTACGGTA TCATGCACTT CACGCCAACC ACTTTCGAAA ACAAGGAGTG GGGCTACGGC GATGCAGATC CCAAGACTTT CAACCCCACC GATTTCAACG CCGACCAGAT CGTCTCGGCC GCCAAAGCCG GTGGCCTGCG CGGGATCGTG CTTGTGGCGA AACATCACGA TGGTTTCTGC CTCTGGCCAA CCAAAACGAC CGACTATAAC ATTACCAAAA GCCCTTTCCG CGGCGGTAAG GGGGATTTGG TGCGCGAAGT GGCCGATGCG GCGCGCAAGC AAGGACTGAA ATTCGGAGTA TATTGCTCGC CCTGGGACCG TAACAATGCG AAATACGGCA CGCCGGAATA CATCAAAATT TACCGTGAGC AGCTGCGTGA GCTGTATACG AATTACGGTG ACCTGTTTAT GTCGTGGCAC GACGGAGCCA ATGGCGGCGA CGGCTACTAT GGCGGCGCAA GAGAGAAACG CTCGATCGAC AACACAACCT ATTACCAATG GGATTCGACG TGGACCAACT ACACCCGCAA ACTCCAACCG AATGCGAGCA TTTTCAGCGA TATCGGCTGG GACGTGCGCT GGGCAGGCAA TGAAGACGGC AGCGTGAACC CGACTTCATG GGCTACGCTC ACTCCCAAGC CATCGGAAGG ACAGAATGTG GCCGTTCCCG GCCAGGCCAA CGCAACGGAA AACCCCGGCG GTACACGCGG AGGCAAGTTC TGGATTCCGG CGGAATGCGA CGTACCATTG CGTAAAGGAT GGTTTTACCA CGAAAACGAA AAGCCGAAAA CACCTGAAAA GCTTTTTGAT CTGTACCTCA AAAGCGTAGG ACGCGGCGCC GCGCTCGATC TGGGACTGGC ACCCGACACC CGCGGACAAC TGCATAACGA CGACGTGGCC GTGCTGAAAA CCTTCGGGGA CCGCGTGAAG AACACCTTCG CCACCAACCT GATCGCCCGC GGTTCATCGA AAGCCGTGAA CGTTCGCGGT TACAATTCGA TTTACAGCGC CAAAAACCTG CTCGACGGCA AGCCGGACAC TTACTGGGCT ACCGACGACG ATTTCAAAAC ACCCGAAGTG GTGATCGAAT TATCGCAGCC GATCGTTTTC GATGTGATAA GCTTGCAGGA ATACATCAAA CTCGGCCAGC GCATTGAAGA ATTCGCCGTG GACGCCTGGA TCGGTAATGA ATGGAAGGAG ATTTACAAAG GCACCAGCGT AGGTGCCAAG CGCATTGCGC GGCTGGACGT CCCCATTACT TCCAACAAAC TGCGCCTCCG CGTTACCAAA TCTCCGGTAA GCATTGCCAT CAGCGAGTTT GGTGTTTACA AGGATGCAGA ATAA
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Protein sequence | MIKQITGLLC LTASIAFAQT PPKPYGALPA PRQLAWHETE VYGIMHFTPT TFENKEWGYG DADPKTFNPT DFNADQIVSA AKAGGLRGIV LVAKHHDGFC LWPTKTTDYN ITKSPFRGGK GDLVREVADA ARKQGLKFGV YCSPWDRNNA KYGTPEYIKI YREQLRELYT NYGDLFMSWH DGANGGDGYY GGAREKRSID NTTYYQWDST WTNYTRKLQP NASIFSDIGW DVRWAGNEDG SVNPTSWATL TPKPSEGQNV AVPGQANATE NPGGTRGGKF WIPAECDVPL RKGWFYHENE KPKTPEKLFD LYLKSVGRGA ALDLGLAPDT RGQLHNDDVA VLKTFGDRVK NTFATNLIAR GSSKAVNVRG YNSIYSAKNL LDGKPDTYWA TDDDFKTPEV VIELSQPIVF DVISLQEYIK LGQRIEEFAV DAWIGNEWKE IYKGTSVGAK RIARLDVPIT SNKLRLRVTK SPVSIAISEF GVYKDAE
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