Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2595 |
Symbol | |
ID | 8226167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 3200678 |
End bp | 3202099 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644930426 |
Product | Alpha-L-fucosidase |
Protein accession | YP_003086977 |
Protein GI | 255036356 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3669] Alpha-L-fucosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTCA GATCAACAGC AGCCCTGCTT GCCGGGCTGT TCTTTGCGTC CGCGTCGTAT GCGCAGCAGC ATTCGGAGCA GAACCACTCC AAATATGTAG CGCCCACCGA CCCGCTTGTG CAGCAAAAAC TCTCCAAATG GCAGGACGTC AAATTCGGCT TGCTCATGCA TTGGGGCACA TACAGCCAGT GGGGGATCGT GGAATCCTGG TCGCTATGCC CCGAAGATGA AGGCTGGTGC GAACGCCGCG GCCCGCATTC ACACGATTGG TACGAGTACA AAAAGGCTTA CGAGGATATT GCCAAGACAT TCAATCCAGT AAAATTCAAC CCTGAACGCT GGGCGAAAGC CGCAAAAGGT GCGGGTATGA AATACTTGGT TTTCACGACG AAGCACCACG ACGGCTTTTC GATGTTCGAT TCGAAATACA CCGATTATAA AATCACCAAC ACGCCGTTCA AGAGCAATCC GAAGGCGAAC GTCACCAAGG AAGTACTCGC CGCATTCCGC AACGAAGGCT TCATGACGGG CACCTACTTC TCGAAACCCG ACTGGCATAC CGACTCCTAC TGGTGGCCTT ACTTCCCGCC GAAGGACCGC AACGTATCCT ACGACCCGAA AAAGCGCCCG GATCTTTGGA ACAAATTCAA AGACTTTACT TACAACCAGA TCGAAGAACT GATGTCGGAT TACGGCTCGG TAGACATCCT CTGGCTCGAC GGCGGCTGGG TCCGCCCGAA AAGCAGCATC GACACGACCA TCAGCTGGCA GAAAACCATC CCCTACGATC AGGACATCGA CATGGCGCGC ATTGCCAAAA TGGCCCGCTC GCATCAGCCC GGCCTGCTGG TGGTGGACCG CACTGTTTCC GGCGAATTCG AAAACTACGT AACACCGGAG CAATCGATCC CGGATCATTA TATGTCGATC CCCTGGGAAT CGTGCATGAC AATGGGCGAC TCCTGGTCTT ACATTCCGAA AGAAAACTTC AAGTCGACCC AGAAACTGGT GCACACGCTG GTGGACATCG TTGCGAAAGG CGGCAACCTG CTCCTGAACG TCGCCCCGGG GCCCGATGGC GAATGGCACG AAGAAGCTTA CACGCGCCTG GAAGAAATGG GTAAATGGAT GAATGTGAAT GGTGTAGGTA TTTATGAAAC CAAGCCGCTC GCGCCCTACC GGGCCGGCAA ATGGGCTTAT ACCAAAAAAG GCAACACCAC CTACGCCTTC TACCTGGCCG AAGCCGGCGA AAAACTCCCG GCAAGCCTAA AACCGGAAGG CCTGGAAATC CCCGCAAAAG CAAAAATCAC ATTCGCAGGC AACAAAAAAG CCCTGAAAGT GAAAAACGGC GCCATCGAAC TCCCCGCCCG GACAATCACA GAAATAGGCA CGCAGCCGGC TTATTTGTTT GTGATTAATT AA
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Protein sequence | MNFRSTAALL AGLFFASASY AQQHSEQNHS KYVAPTDPLV QQKLSKWQDV KFGLLMHWGT YSQWGIVESW SLCPEDEGWC ERRGPHSHDW YEYKKAYEDI AKTFNPVKFN PERWAKAAKG AGMKYLVFTT KHHDGFSMFD SKYTDYKITN TPFKSNPKAN VTKEVLAAFR NEGFMTGTYF SKPDWHTDSY WWPYFPPKDR NVSYDPKKRP DLWNKFKDFT YNQIEELMSD YGSVDILWLD GGWVRPKSSI DTTISWQKTI PYDQDIDMAR IAKMARSHQP GLLVVDRTVS GEFENYVTPE QSIPDHYMSI PWESCMTMGD SWSYIPKENF KSTQKLVHTL VDIVAKGGNL LLNVAPGPDG EWHEEAYTRL EEMGKWMNVN GVGIYETKPL APYRAGKWAY TKKGNTTYAF YLAEAGEKLP ASLKPEGLEI PAKAKITFAG NKKALKVKNG AIELPARTIT EIGTQPAYLF VIN
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