Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2503 |
Symbol | |
ID | 8226075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 3081293 |
End bp | 3082963 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644930335 |
Product | glutaminyl-tRNA synthetase |
Protein accession | YP_003086886 |
Protein GI | 255036265 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
TIGRFAM ID | [TIGR00440] glutaminyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00970277 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.785784 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTACGG AAGATAAAAA AGAAGAGAAA AGCCTGAACT TTATCGAGGA GATTATTAAC GCTGACCTGC AATCAGGAAA ATATACTCAG ATTATAACAC GCTTTCCACC CGAACCCAAT GGCTACCTGC ACATTGGGCA TGCTACCAGC ATTCACCTGA ATTTCGGGCT GACCAAGAAG TTTCCGGGTT ATACCAATCT GCGATTTGAC GATACCAATC CGGTGACCGA AGACACCGAA TACGTTGAAA ATATCAAGAA TGACATCCGC TGGCTGGGTT TCCAATGGGA GAATGAAAAC TACGCCTCCG ATTATTTCGA TACACTTTAC GGCTACGCGA TCAGGCTGAT CAACGAGGGC CTTGCCTACG TGGACGATTC CACTTCGGAA GAAATAGCGA CATTGAAAGG TACGCCTACC GAGCCTGGCA AAGACAGCCC CTACCGCAAC CGCAGCGTGG AGGAAAATCT TGCACTTTTC GAACAAATGA AAAGCGGCGC ATTCCCCGAC GGAAGCCGCA CTTTGCGTGC GAAGATCGAC ATGGCGCACA TCAATATGCT CATGCGCGAC CCGATTTTGT ACCGTATCAA GCACGCACAT CATCACCGCA CCGGCAACAA ATGGTGCATT TACCCGATGT ACGACTTCGC GCACGGACAA AGCGACGCGA TCGAAACCGT GACGCATTCG ATTTGTACCC TCGAATTCGC CCCACACCGC GAACTATATG ATTGGCTGAT TGAAAAACTG GGCATTTACC CGTCTCACCA ATACGAATTT GCGCGCCGTA ACCTGAACTA CACTGTCACC AGCAAACGGA AATTGCTGCA ACTCGTACAG GAAGGCCACG TGAGCGGATG GGACGACCCG CGCATGCCGA CGATCAGCGG AATGCGCCGG AGAGGTTACA CCGCATTCGC GATCCGCGAT TTCTGCGACC GCATCGGTGT GGCCAAAAGG GAGAATATGG TGGATGTAGG CCTGCTGGAA TTTTGCGTGC GCGAAGACCT CAACAAAATA GCGCTGCGCC GGATGGTGGT GCTCGACCCG CTGAAAGTGG TGATTACGAA CTTCCCCGAA GGCGTAACCG AAATGTGCCA CAGCGAAAAC AACCCCGAGG ACATATCGAC AGGCAACCGC GAGATTCCTT TCACCCGCGA GATTTTCATC GAAAAAGAAG ATTTCATGGA AGTGCCTTCG AAGAAATATT TCCGCCTCGC GCCGGGTAAA ATGGTGCGTC TTAAGGGTGC GTACATAATA CAGTGTGATG ATTTTGTAAA AGACGAAAAC GGCGAAATCA CCGAAGTTCG CTGCACCTAT ATTGAAAACA GCAAAAGCGG ACAGGATACG ACCGGCATTA ATGTAAAGGG AACGCTGCAT TGGGTTTCGG CCCAGCATGC GCTCGAAGTG GAGGTCCGGT TGTACGACCG CCTGTTCTCG GTCGAAGATC CGTCGTCCGA AGAAGGCGAT TTCAAAGATT ATCTCAACCC CGACTCGCTG CATGTAATTA CCGGCTACGC CGAACCTGCA CTGCTCGAAG CCCAGGAAGG CGAAGCATTC CAGTTCCTGC GCAAAGGCTA CTTCGCCAAA GACCCCGACA GCACCGTCGA AAAGCTGGTT TTCAACCGCA CATCGACCCT GCGGGATAAC TGGGCGAAGG CTGGGAACTG A
|
Protein sequence | MITEDKKEEK SLNFIEEIIN ADLQSGKYTQ IITRFPPEPN GYLHIGHATS IHLNFGLTKK FPGYTNLRFD DTNPVTEDTE YVENIKNDIR WLGFQWENEN YASDYFDTLY GYAIRLINEG LAYVDDSTSE EIATLKGTPT EPGKDSPYRN RSVEENLALF EQMKSGAFPD GSRTLRAKID MAHINMLMRD PILYRIKHAH HHRTGNKWCI YPMYDFAHGQ SDAIETVTHS ICTLEFAPHR ELYDWLIEKL GIYPSHQYEF ARRNLNYTVT SKRKLLQLVQ EGHVSGWDDP RMPTISGMRR RGYTAFAIRD FCDRIGVAKR ENMVDVGLLE FCVREDLNKI ALRRMVVLDP LKVVITNFPE GVTEMCHSEN NPEDISTGNR EIPFTREIFI EKEDFMEVPS KKYFRLAPGK MVRLKGAYII QCDDFVKDEN GEITEVRCTY IENSKSGQDT TGINVKGTLH WVSAQHALEV EVRLYDRLFS VEDPSSEEGD FKDYLNPDSL HVITGYAEPA LLEAQEGEAF QFLRKGYFAK DPDSTVEKLV FNRTSTLRDN WAKAGN
|
| |