Gene Dfer_2479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2479 
Symbol 
ID8226051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3052673 
End bp3053815 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content52% 
IMG OID644930311 
Productglycosyl transferase group 1 
Protein accessionYP_003086862 
Protein GI255036241 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0145757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTG GTATCGTATG CTATCCTACC TTCGGAGGAA GCGGTGTGGT AGCTACCGAG 
CTTGGAAAAG CGCTTGCGAA AGCCGGCCAC CAGGTTCATT TCATTACCTA TTCCCAGCCC
CAACGGCTGG ATTTTTTTAA TGAGAACCTC TATTATCATG AAGTAAATAT ACCTGCCTAT
CCGTTGTTCC AGTACCCGCC TTACGAGTCG GCGCTTTCGA GCGAAATGGT GCATGTGGTA
GCCAATGCGG GCCTCGATTT ACTCCACGTA CATTACGCGA TCCCGCACGC ATCGTCGGCG
TACCTCGCCA AACAGATCTT AGCCGCACAG GGCATTCATA TCCCGGTGAT TACGACGCTG
CACGGAACGG ACATCACGCT GGTCGGAAAA GACCCTTCTT ACGAGCCGGT GGTTACATTC
AGTATTAATC AATCGGACGG CATTACCACT GTTTCCGAAT CACTTAAAAA AGATACCTAC
GATCATTTCA AGATCACCAA GGACATTGAG GTAATCCCCA ACTTTATCGA TCTCGACCGG
TTCAACCGGC AAAAGAAAGA CCATTTCAAA CTTGCCATCT GTCCCAACAA CGAAAAGCTT
ATTGTCCATA CCTCCAATTT CAGGAAAGTA AAGCGGATCG ACGACGTGAT CATGATCTTC
GAAAAGCTGC GCACGCTCCT GCCGAGCAAA CTGCTCCTCG TAGGCGACGG CCCCGATCGT
ATGCGCATCG AGCGCCTGTG CAAGGACCTG GATATGCTGT CGGACGTCCG TTTCCTCGGT
AAGCTGGATG CTATCGAAGA AGTACTTTCC GTGGCCGACC TGTTCCTGAT GCCTTCGGAA
TCGGAGAGCT TCGGCCTCGC GGCCCTCGAA GCATTGGCCT GCGAAGTGCC CATTATCACG
TCCAATGCCG GCGGACTGCC TGAGCTGAAC GTGCATGGCG TAACCGGCTT CCTGAGCGAC
GTGGGTGATG TGGAAGACAT GGTGAAGCAC GCCGCCTATA TCCTCGACGA TGCCAACCTG
CCGACCTTCA AAGCCAATGC CCTGGCGAGA GCGAAGGAGT TTGATGTGGC CAAAATTCTA
CCGCATTATG AAGCCTATTA CGAGCGCGTG GTGGAGAACA GCAAGGCGGT CGATCTGGCA
TAG
 
Protein sequence
MKIGIVCYPT FGGSGVVATE LGKALAKAGH QVHFITYSQP QRLDFFNENL YYHEVNIPAY 
PLFQYPPYES ALSSEMVHVV ANAGLDLLHV HYAIPHASSA YLAKQILAAQ GIHIPVITTL
HGTDITLVGK DPSYEPVVTF SINQSDGITT VSESLKKDTY DHFKITKDIE VIPNFIDLDR
FNRQKKDHFK LAICPNNEKL IVHTSNFRKV KRIDDVIMIF EKLRTLLPSK LLLVGDGPDR
MRIERLCKDL DMLSDVRFLG KLDAIEEVLS VADLFLMPSE SESFGLAALE ALACEVPIIT
SNAGGLPELN VHGVTGFLSD VGDVEDMVKH AAYILDDANL PTFKANALAR AKEFDVAKIL
PHYEAYYERV VENSKAVDLA