| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2476 |
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| Symbol | carB |
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| ID | 8226048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 3044974 |
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| End bp | 3047817 |
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| Gene Length | 2844 bp |
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| Protein Length | 947 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644930308 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_003086859 |
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| Protein GI | 255036238 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCAAAA ATACGAATAT CAAATCCGTT CTGATTATCG GTTCAGGTCC CATCGTTATC
GGTCAGGCGT GCGAGTTTGA CTATTCCGGC TCTCAGGCAG CCCGCTCGTT GCGCGAAGAG
GGGATTGAGG TAGTTCTGAT CAACTCCAAT CCTGCAACCA TCATGACTGA CCCTATCAGT
GCAGATCATG TGTACCTGTT GCCGCTGGAA AAGAAGTACA TCGTTGAAAT TCTGGAAAAA
CACAAGGCGA TGGGCAGGCC CATCGACGCG GTACTCCCTA CCATGGGAGG CCAAACGGCG
CTGAACCTGG CAATCGATTG CGACAAGGCA GGTATCTGGA AAAAGTATGA TGTGGATATT
ATCGGTGTGG ATATCAAAGC GATTGAAACA ACCGAAGACC GGGAGAAATT CCGTCTGAAA
ATGCTCGAAC TGGGCGTAAA CGTATGCCAG GGCCGTACCG CCCGCTCCTT CCTCGAAGGA
AAGGAGATCG CCCAGGAAAT CGGCTTCCCG CTTGTAATTC GTCCTTCATT TACCCTTGGC
GGTACGGGAG GTGGATTTGT GGACAAAGAA GAGGATTTCG ACAAAGCCCT AAACTACGGT
CTGCACGCAT CTCCTGTACA CGAAGTACTC GTTGAGCAGA GCGTAATGGG CTGGAAAGAG
TACGAATTGG AGCTCCTTCG CGACAGCAAG GGTAACTTCA TCATCATCTG TTCGATCGAA
AACTTCGATC CGATGGGTGT GCACACCGGC GACAGTATCA CGGTTGCACC TGCCATGACG
CTCCCCGATA CATTATACCA GCAAATGCGC GACCTGGCGA TCAAGATGAT GAACGGGATC
GGCAAGTTTG CGGGTGGCTG TAACGTACAG TTCTCTGTAA ACCCTGCGGA CGACAAGATC
ATCGCGATCG AAATCAACCC GCGCGTTTCA CGCTCGTCGG CACTCGCCTC GAAAGCGACC
GGTTACCCCA TCGCGAAAAT CGCGGCGAAA ATGGCGATCG GTTACGACCT CGACGAGCTC
ATTAACCCGA TCACCGGCAG CACCTCGGCA TTCTTCGAAC CTTCGATCGA CTATGTGATC
GTGAAAGTGC CACGCTGGAA CTTCGATAAG TTCAAAGGTG CCGATCGTTC ACTCGGCCTT
CAGATGAAGT CGGTAGGTGA AGCAATGGGT ATCGGACGTA ACTTCCAGGA AGCATTGCAG
AAAGCTTGCC AGTCGCTCGA AATCCGCCGC AACGGCCTGG GCGCCGACGG CCGCGAGCTC
CGCGACCAGG AGGCGATCAA GCAAAGCCTG GCACATCCGA GCTGGGACCG CCTGTTCCAC
ATTTATGATG CATTCAAAAT AGGTTTGTCG TTCAAAACGA TCCAGAACCT GACCAAAATA
GACGCGTGGT TCCTCCGCCA GATCGAAGAG CTGATCGAGC TGGAACACGA AATCGAGAAA
TTCGACCTCG ACGACCTGCC GAAAGAATTG CTTTTGACAG CCAAACAAAA AGGATACGCC
GACCGCCAGA TCGCACATTT GCTGGGTACG AAAGAAAGCA AAGTGTACGA TCGCCGGAAA
GAGCTGGGTA TCAAACGCGT ATACAAATGC GTTGACACCT GCGCAGCCGA ATTTGAAGCA
AAAACGCCTT ACTACTACTC TACTTTCAAC ACGTCGCAGG AATTCCCCGA CAACGAATCG
GTGGTAAGCG ACCGCAAGAA AGTAATGGTA CTCGGCTCGG GCCCTAACCG CATCGGCCAG
GGTATCGAAT TCGACTACTC TTGCGTACAC GGCGTGCTGG CCGCGAAAGA GGCTGGTTAC
GAGACGATTA TGGTTAACTG TAACCCTGAA ACCGTTTCTA CCGACCCGGA TATTTCCGAC
AAACTATACT TCGAGCCGGT ATTCTGGGAG CACGTTTTCG ACATTATCGA GCACGAAAAG
CCTGAGGGCG TGATCGTTCA GCTGGGTGGT CAGACGGCCT TGAAAATGGC TGAAAAACTC
GAAAAATACG GTATCAAAAT CATCGGTACC GACTTCCACT CGCTCGACTG GGCTGAGGAC
CGTGGACGGT TCTCGTCGCT CCTCGAAGAG CTGGGCATTC CGTTCCCGAA ATTCGGCACG
GTAAGGTCTT CCGATGCCGC GGTAGAGCTT TCGCGCAGCC TGGGCTTCCC GCTGCTGGTT
CGTCCGAGCT ACGTATTGGG TGGACAAAGC ATGAAAATCG TGATCAACGA GAAGGAACTG
GAACAGCATG TGGTGAAAAT CCTGCACGAC ATTCCGGATA ACAACATCCT CCTCGACCAC
TTCCTCGAAG GTGCATTGGA AGCAGAAGCC GACGCGATCT GCGACGGTGA AGACGCTTAC
ATCATCGGTG TAATGGAGCA TATCGAGCCT GCGGGTATCC ACTCCGGCGA CTCCCACGCA
GCATTGCCGC CATTCGACCT CACGGCTGAC GAAATCCGCC AGATCGAAGA GCATACCCGC
AAAATTGCAT TGGCAATGAA TGTAAAAGGG CTCATTAACG TACAATTCGC GGTGAAAGAC
GGCGTGGTGT ACGTGATCGA AGCCAACCCG CGTGCATCGC GCACCGTTCC GTTCATTTGC
AAGGCTTACC AGGAGCCATA TGTGAACTTC GCTACCAAGC TGATGCTCGG CGACAAGAAA
GTGAAGGATT TCAACTTCAA ACCGGTGAAA GAAGGCTGGG CGATCAAAAT CCCTGTATTC
TCATTCAACA AATTCCCGAA TGTGAACAAG GAGCTCGGTC CTGAAATGAA ATCGACCGGT
GAGGCAATCT ACTTCATCAA GGATCTCGAA GACGAATTCT TCCAGAAGAT TTACGCCGAG
AGAAACCTGT ATCTGAGCCG CTAA
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| Protein sequence | MPKNTNIKSV LIIGSGPIVI GQACEFDYSG SQAARSLREE GIEVVLINSN PATIMTDPIS
ADHVYLLPLE KKYIVEILEK HKAMGRPIDA VLPTMGGQTA LNLAIDCDKA GIWKKYDVDI
IGVDIKAIET TEDREKFRLK MLELGVNVCQ GRTARSFLEG KEIAQEIGFP LVIRPSFTLG
GTGGGFVDKE EDFDKALNYG LHASPVHEVL VEQSVMGWKE YELELLRDSK GNFIIICSIE
NFDPMGVHTG DSITVAPAMT LPDTLYQQMR DLAIKMMNGI GKFAGGCNVQ FSVNPADDKI
IAIEINPRVS RSSALASKAT GYPIAKIAAK MAIGYDLDEL INPITGSTSA FFEPSIDYVI
VKVPRWNFDK FKGADRSLGL QMKSVGEAMG IGRNFQEALQ KACQSLEIRR NGLGADGREL
RDQEAIKQSL AHPSWDRLFH IYDAFKIGLS FKTIQNLTKI DAWFLRQIEE LIELEHEIEK
FDLDDLPKEL LLTAKQKGYA DRQIAHLLGT KESKVYDRRK ELGIKRVYKC VDTCAAEFEA
KTPYYYSTFN TSQEFPDNES VVSDRKKVMV LGSGPNRIGQ GIEFDYSCVH GVLAAKEAGY
ETIMVNCNPE TVSTDPDISD KLYFEPVFWE HVFDIIEHEK PEGVIVQLGG QTALKMAEKL
EKYGIKIIGT DFHSLDWAED RGRFSSLLEE LGIPFPKFGT VRSSDAAVEL SRSLGFPLLV
RPSYVLGGQS MKIVINEKEL EQHVVKILHD IPDNNILLDH FLEGALEAEA DAICDGEDAY
IIGVMEHIEP AGIHSGDSHA ALPPFDLTAD EIRQIEEHTR KIALAMNVKG LINVQFAVKD
GVVYVIEANP RASRTVPFIC KAYQEPYVNF ATKLMLGDKK VKDFNFKPVK EGWAIKIPVF
SFNKFPNVNK ELGPEMKSTG EAIYFIKDLE DEFFQKIYAE RNLYLSR
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