Gene Dfer_2450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2450 
Symbol 
ID8226022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3014936 
End bp3016033 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content52% 
IMG OID644930282 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_003086833 
Protein GI255036212 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCATT ACCGCAATTT TCTTCCGGAG GAACTGGCCG CCGATCCATC TTTCAGACGC 
TGGGTGCTGT TTAATAACCC CGCCGACGAG GCCGTATGGA CCGAATGGCT CGAACATAAT
CCGGATAAGC AGGATCTCGT GAACCGCGCC AGGAATTTCC TGACGATGAC GGAAACGGCA
TTCGACCAGA TTTCGGATGA GGAGGTGGCT AACGAAATTT ACCGGCTGTC GCACGCGATT
GGCGAGCATC ATGCGAAAAA ATCGTCGATC TGGCTGCGTT TCAGGCCAAA TTGGTACCAT
ATGGCGGCTT CGGTGCTCAT TCTCATGTTT GCCGGATGGT GGTATAACAA GCAAACGCTT
TCGCAACAGC AATCGGATCA ATATAAGGTG ATCCTCAGCC AGATCAGCGA GCCGCTTATC
GAGGCGGTGA ACCAGGGCAA TGAGGCGAAA TTGGTGACCC TCGAAGACGG CAGTTCGGTG
CTGTTACAGC CCGATAGCCG CATTACCTAC CCCCGGCGCT TCGAGGGCCG CAAAAGGGAG
GTTTTCCTGA AAGGGGAAGC GTTTTTTGAA GTGGCCAAAA ATCCTGACAA GCCCTTTTAT
GTGTACGCAC ATACGCTGGC AACCAAGGTG TTAGGCACAA GTTTCAAAGT GAGCGCGTTC
GACGACCAGG AAGTGAAGGT GGTGGTTAAA ACGGGTAAAG TGTCCGTTTT CCCGATGACG
AAGGAGGCGA TCGCCAGCCA GCATGCGGAC GACAAGCTCG GCGGGATGGT GCTTACGCCC
AATCAGCAGA TCACATTCGC ACCTAATGAG TTACGACTTA CGAGAAGCCT CATCCCGGAC
CCGAAATTAT TGGAATTACC GATACAGAGA CAGTCGTTTG AATTCAAGGG AACGCCGATC
ACCGAAGTAT TTGCCGCATT GGAAAAATCC TATGGCGTAA AGATCGTGTT CGATGCGGAA
GTAATGCAGA ACTGCTACCT CACCGCTTCG CTTTCCGACG AGCCGCTTTT TGAGAAAATT
AACCTGATAT GCAAAACCAT CGGCGCGCAA TATGAGCAGC TCGATGCCAG CATCATCATC
AATAGCAAAG GATGTTAA
 
Protein sequence
MLHYRNFLPE ELAADPSFRR WVLFNNPADE AVWTEWLEHN PDKQDLVNRA RNFLTMTETA 
FDQISDEEVA NEIYRLSHAI GEHHAKKSSI WLRFRPNWYH MAASVLILMF AGWWYNKQTL
SQQQSDQYKV ILSQISEPLI EAVNQGNEAK LVTLEDGSSV LLQPDSRITY PRRFEGRKRE
VFLKGEAFFE VAKNPDKPFY VYAHTLATKV LGTSFKVSAF DDQEVKVVVK TGKVSVFPMT
KEAIASQHAD DKLGGMVLTP NQQITFAPNE LRLTRSLIPD PKLLELPIQR QSFEFKGTPI
TEVFAALEKS YGVKIVFDAE VMQNCYLTAS LSDEPLFEKI NLICKTIGAQ YEQLDASIII
NSKGC