Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2446 |
Symbol | |
ID | 8226018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 3011790 |
End bp | 3012401 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644930278 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003086829 |
Protein GI | 255036208 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.914763 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACAAGA AACAACGCAT AGCCGAAGAG AATGAAGTTC TGTTGAATCT CTGGCACCAA AGCCAGGCCG GGGACAGTCT GGCATTTTGC CAACTGGCCG ACAAGCAGTA TCGAATCCTG TTCAACTACG CCTGCAATTT CACTTCCGAC CGCGAATTCA TCAAAGACGC AATTCAAGAC CTGATGATCC ACATCTGGGA AAGGCGCCAG AGTATTCAGA TCCAGTTTGT TACCATCTAC TTCCTCCGCG CATTGCGCAA CCAGCTCATG CAGGAGTTCC GCCGCAATAA TGGCTCGCAT CCGTTTCTCG ACATTGACGA GGCTGGCCAG CTTTCCGACT ATCAGACGGT AGAAACCGAA ATCGAACGCA AGGAACTACT GAGCGAAAAC CAGGTTAAAG TGCGCTGTGC CATCGAAGAG TTACCTCGTC GTCAGAAAGA GGCCGTTTTC CTCAAATACT TTGAAGGCAT GGACAACGAG CAGATCGCCG ACCTCATGCA GGTAAACCGG CAGTCCGTCG CCAACCTGCT TTTCAAAGCT ATCTCGGCGC TCAAACAACA CATCCACCCG ATCAGCAATC TGCTGCTGCT TTGCTTCGCG CTGAAATTTT AG
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Protein sequence | MNKKQRIAEE NEVLLNLWHQ SQAGDSLAFC QLADKQYRIL FNYACNFTSD REFIKDAIQD LMIHIWERRQ SIQIQFVTIY FLRALRNQLM QEFRRNNGSH PFLDIDEAGQ LSDYQTVETE IERKELLSEN QVKVRCAIEE LPRRQKEAVF LKYFEGMDNE QIADLMQVNR QSVANLLFKA ISALKQHIHP ISNLLLLCFA LKF
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