| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2400 |
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| Symbol | |
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| ID | 8225972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 2959440 |
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| End bp | 2960027 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644930232 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003086783 |
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| Protein GI | 255036162 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGAACA ATTTTTACGC TACCTGTTCC GATGAAAATA TCCTTGCGCT AATCAGCGAG
CAGGACGATG AGCTGGCCTT CGGGGAACTG TACAACCGCT ACTTCAAAAC GCTGTTCAAT
TACGCTTATT CAAAGGTTAA TGACCGCTTC ACGGCGCAGG AAATCGTTCA GGAGCTGTTT
GTGAATGTCT GGCAGAAACG CCGCCAGAAC CAGGTGGAAT GCGGCCAGTC ATTTCTTTTT
ACAATTGCCA AACGGCTGAT AATATCTTTC TACCGGAAAG AATACACGCG TCAGCACCAC
TATGGGCAAT GGGAAATCCA CCGCAGCGAG GCTTCCGAGC CCGCCGACCA GCCTACTCTC
GCCTCCGATC TTCAGCACCG CTACGAAGAA GGGCTTCATT TGCTTTCTCC CAAATGCCAG
GAAGTGTTTG TGATGAGCCG CCAGGGCTTT TCCAACAAGC AGATCGGCGA GCAGCTCGGC
ATTTCGGAAA AAACCGTGGA GCAGCACATT ACCAAGGCGT TACGCATTTT GAAAGCGCAT
TTGAAAGAGC ACATGATCTG CGCCCTGCTC CTTTTTGCTT CTATCTAA
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| Protein sequence | MMNNFYATCS DENILALISE QDDELAFGEL YNRYFKTLFN YAYSKVNDRF TAQEIVQELF
VNVWQKRRQN QVECGQSFLF TIAKRLIISF YRKEYTRQHH YGQWEIHRSE ASEPADQPTL
ASDLQHRYEE GLHLLSPKCQ EVFVMSRQGF SNKQIGEQLG ISEKTVEQHI TKALRILKAH
LKEHMICALL LFASI
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