Gene Dfer_2396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2396 
Symbol 
ID8225968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2954105 
End bp2954809 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content54% 
IMG OID644930228 
Productclass II aldolase/adducin family protein 
Protein accessionYP_003086779 
Protein GI255036158 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID[TIGR00760] L-ribulose-5-phosphate 4-epimerase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAAT ACAAATACCT GAAAGAGCAG GTGTACGAGG CCAATATGGA AATCCCGCGG 
GAAGAGCTGG CGATCGTGAC TTTTGGCAAC GTGAGCGGTG TAGACCGGGC GGAAGGCGTG
GTGGCGATCA AGCCGAGCGG CGTGCCTTAC CACCGGCTGA AAGTGGAGGA TATCGTGATC
GTGGACCTGG ATAATGCGTT AGTAGAAGGG AATATGCGCC CGTCTTCCGA CACTAAGACG
CATACTTTGC TCTACAAAAG CTTCCCGTCG ATTGGGGGCG TTTGTCATAC GCATTCTACA
TACGCGGTAG CGTGGGCACA GGCGATCCGG CCCATTCCGA ACCTGGGAAC GACGCACGCC
GACCACCTGA CGGCCGCTAT TCCCGTGACG GAAGTGATGT CCGACGAGAT GATCCAGCGC
GACTACGAGC TGGAAACGGG CAATCAGATA CTGGATCTGT TCAAAAAGGA AAACCTGAGC
TACGAAGAGG TGGAAATGGT GCTGGTGGCC TGCCACGGCC CATTTACCTG GGGGAAAGAT
CCGGCAAAGG CGATATACAA TTCAATTGTG CTGGAAGAAA TTGCCAAAAT GGCCTATCTC
ACGTTGCAGA TCAACCCCTC GGTCACGACC ATCAAGCAAA GCCTGATCGA CAAGCATTAC
TTCCGGAAAC ACGGCAAAGA TGCCTATTAC GGCCAGGGCT GCTAG
 
Protein sequence
MSKYKYLKEQ VYEANMEIPR EELAIVTFGN VSGVDRAEGV VAIKPSGVPY HRLKVEDIVI 
VDLDNALVEG NMRPSSDTKT HTLLYKSFPS IGGVCHTHST YAVAWAQAIR PIPNLGTTHA
DHLTAAIPVT EVMSDEMIQR DYELETGNQI LDLFKKENLS YEEVEMVLVA CHGPFTWGKD
PAKAIYNSIV LEEIAKMAYL TLQINPSVTT IKQSLIDKHY FRKHGKDAYY GQGC