Gene Dfer_2388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2388 
Symbol 
ID8225960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2945740 
End bp2946204 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content47% 
IMG OID644930220 
Productresponse regulator receiver protein 
Protein accessionYP_003086771 
Protein GI255036150 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.319662 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAG GAAAAATAAG CGTACTGTAT GTGGATGATG AAATCAACAA CCTCAACTCA 
TTCAAGGCCG CTTTCAGAAG GGATTTCAAT ATTTTAATTG CGACTTCGGG CCGCGAAGGC
CTCGAACTTT TGAAGCACAA TGTCGTGCAC GTCATCATCA CCGATCAGCG GATGCCCGAA
ATGACCGGTG TGGATTTCCT GATCGAAGTT TTGAAGGACT ATGCAGACCC CGTCCGTATC
CTGCTCACGG GCTACACGGA CATTACCGCC GTGATCGACG CGGTGAACAA AGGGCACATT
TATTATTACC TCAATAAACC CTGGGATGAG CAGCAGCTTC GCATTATCAT CAAAAATGCG
TACGAAATTT TCCACCTGCG GGAAGAAAAC AAGGAGCTGA TCGAGAAACT CATCGATGTG
AACGGCCAGC TGGAATTCCT GCTGCGCCAA AATCTGCTTT CTTAA
 
Protein sequence
MEKGKISVLY VDDEINNLNS FKAAFRRDFN ILIATSGREG LELLKHNVVH VIITDQRMPE 
MTGVDFLIEV LKDYADPVRI LLTGYTDITA VIDAVNKGHI YYYLNKPWDE QQLRIIIKNA
YEIFHLREEN KELIEKLIDV NGQLEFLLRQ NLLS