Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2374 |
Symbol | |
ID | 8225946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 2930286 |
End bp | 2933192 |
Gene Length | 2907 bp |
Protein Length | 968 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644930206 |
Product | hypothetical protein |
Protein accession | YP_003086757 |
Protein GI | 255036136 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3893] Inactivated superfamily I helicase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATCAT TCCTGAACCT CATAGCCAAA CGCATTCTCG CCAACCATAC CTCGCTCGAT CGCGTGCAGA TCGTGGTGCC GACGCGGCGG GCGGCATTTT TTCTGATGCG GGAAATGGCC GGCGAAACAA CCGAGCCGCT CATGAGCCCG GGCATTATGG CCATCGACGA TTTTGTGGAA AGCATCTGCC GACTCGAAAT CGAGGACCCG GTGCATTTGC TGTTCGATCT GTACGAAACA TTCCGGGAAA TAGACCCCGA CGTGCAGTTC GACCGGTTTA TGGGCTGGGC TTCGGTGCTG CTGAGCGACC TCGATAAGAT CGATCAGTAC CTGGTGAAAA CCGATTTCCT GTTCGAATAC CTTTCGGAAG CGCATGCGCT TTCGCGCTGG CAGGAAAGCT TGCCCGAAGG CCGGTCGCTC AACAGCGAGG GCGGTTCGAG GCAGTATTTC TCGCTGTTTG AGAACATCCA TCAGGTGTAC CGGTCGTTCA GGCAGCGGCT GCTGGCCAAG GGGAAAGCCT ACCGGGGCAT GGCCTACCGC GAGCTGGCGA CGGACATTGC CAACCTCTCC GCCGATCTCC CCGAGATGGA ACGGATTTAT TTTGCCGGTT TCAATGCATT CACAACTTCC GAACGGGTGA TCGTGACGGC CCTGGTGAAG GCCAAAAAGG CCGAGGTACT ATGGGATTCG GACCGGTATT ATATGTCGGA AAATACGGTG GTGGAAGCCG GGAAAAGCCT GCGCGAATAC CAGCGGAGCA AGGAGTTCGG TGAATGGAAC TGGACCGGCG ACGAACTGCT GTCTACCGAA AAGCACATTA CCCTTTACGG CGTTCCCAAT GCCACGCTTC AAACCAAGGT AGCCGGAGAG CTTTACCAGC GCATGAAACG CTTCGAAGCG GAAGACGCGC CCGTGCCTAC GGCCATTGTA CTGGCCGACG AAAACCTGCT CCTTCCAATG CTCTATTCGC TGGACGAAGA AGTGCGGGAT CTGAACGTGA CCATGGGGCT ATCCATGCGA AATTCGCTGC TTTACACGCT GGTGGACGGC ATTTTTGAGT TGCAGCAGAA TGTAGTCGAG CTCCGCAGCA GGAGCGGCAA ACTGATCCGC ATTCCGAAAT TCGGGCATAA GTCGGTGGAC AAAATCCTTA ACCACCCGTT TATCCGGCAT TACGAACACG TAGCGCTCAC GCCGCTGGAA GACGGCCAAA CGATCATTCA GCGAACCCTG CGCGAGATTA CCGAAGGCAA CCAGGTGTTC CTGAGCTCGG AGGAACTGGT AACATTGGGC GATAACCACC CGCTTTTTCA GATCCTTTTC ACGCATTGGC AGAAAAACAA TGCACAGCAG GTGATCCGCT CGTTTTACCA GCTGATCGAG CTGTTGCGGG AGGTTTACAA GGATTACAAG AATGCCCTGG AAACGGAATA CCTCTATTTG TTTTACACCT TACTCAAACA ATTCGAACAG ACTATCGAGG AGCGCGCCGA GCTGATCACG CTGCGGACGC TGAAATCGTT TATGTTCGAA CTGATCCGCC AGACGCGCAT TCCATTCAGC GGGGAGCCGG TGAGCAACCT GCAAATTATG GGAATGCTCG AAACAAGGGC ACTGGACTTC GAGCGGATCA TTATTCTATC TGTCAACGAA GGTGTGATAC CGCAGGCGAA GCGACAAAAC TCGCTGATCC CGTTCGACGC CGCGCAGGCT GTGGGCCTGC CTACGCACCA GCACCAGGAG GCGGTCATGT CGTACCATTT TTACCGGCTG CTCCAACGCG CTTCTGAGGT GCATATATTG TACACCAGCA CCAACGACGC GCCCGGCGGC GGCGAGAAGA GCCGTTTTGT GCGGCAAATC GAATATGAGC TCGCGCAATA CAACCCGCTG ATCCGCATCG AGAACAAAAC CGTGGTTTTC GAAGCCCAGG CCCGGCAGGA GCTCGAAGAA GTGGTGCACA AAGACGACGC CCTCATTGCT GCCATCCGCG CTTATCTCGA CGGAAAAGGC ATTTACCCAA CGCATTTGAA TGAGTTTATC CGCTGCTCCA TGCAGTTTTA CCTCAAACAC ATTGCCGGCG TGAAGGAAAA AGAGGAAGTA GAGGAAGAGC TCGGAATGGA CAAAATCGGG ACCTGGCTGC ACGCTTCGCT GGAACGCCTG GACCTGGAAT TTTTCCTGCT GGACAAAGAT CCATCCGAAG AAGAGATCGT GCAGGTGCTG CGCGAGGAAT TCGACCGGCT GTTCAAAGGC TATGTTACCA ACCTGGGTCT CAACCGCATT TACTACCAGA TCGGCGAACA GCAAATCCTG ACCTTCCTGC GCCACCACAT GGCGCAAAAG CCCCGCCGGC AAATCCTGGC CGCCGAGCAG CCGCTGCACA CGCGCATTCA GCTCGTGCTG CAAGGCGCGT TCACACCCGT GCGCCTGGGC GGGAAAATCG ACCGTATCGA GCTGGGGGAA GACGGCATAT TGTATGTGAT GGATTACAAA ACCGGCAGCG TGGAGCTGAC GGGCAAGCAA AAACTGGCCG ATCCTGTGGC CCGGGAGGAA GTAATCCGCG CCGACCCGGA CCGCAAAATG GGTTACGTCC GCCAGCTCTG GATTTACGAA TACCTGATGT ACCGCAGGAT GAAGGAGGAA AATGGATTGA AACTACGCGG CAACACGTAC AATTTCGGCG AATATGCAGT CAAATCGGGC TTCTATTCCT TCCGCGACCC TAAAAACCTG ATCGCCAACC CGCTTGAACT TACCGACCAG CTGGCCCCAG GAGAGTTTAT CGAAAAATCG GAAGTGATCC TGACTGACAT CCTGAATGTA ATGCTCGATC CCGATGTGCC CTTCCGCAAA ACGGACGACC TTACTACCTG CAAATTTTGC GATTTCACCG GCATTTGCGG GCGGTAA
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Protein sequence | MPSFLNLIAK RILANHTSLD RVQIVVPTRR AAFFLMREMA GETTEPLMSP GIMAIDDFVE SICRLEIEDP VHLLFDLYET FREIDPDVQF DRFMGWASVL LSDLDKIDQY LVKTDFLFEY LSEAHALSRW QESLPEGRSL NSEGGSRQYF SLFENIHQVY RSFRQRLLAK GKAYRGMAYR ELATDIANLS ADLPEMERIY FAGFNAFTTS ERVIVTALVK AKKAEVLWDS DRYYMSENTV VEAGKSLREY QRSKEFGEWN WTGDELLSTE KHITLYGVPN ATLQTKVAGE LYQRMKRFEA EDAPVPTAIV LADENLLLPM LYSLDEEVRD LNVTMGLSMR NSLLYTLVDG IFELQQNVVE LRSRSGKLIR IPKFGHKSVD KILNHPFIRH YEHVALTPLE DGQTIIQRTL REITEGNQVF LSSEELVTLG DNHPLFQILF THWQKNNAQQ VIRSFYQLIE LLREVYKDYK NALETEYLYL FYTLLKQFEQ TIEERAELIT LRTLKSFMFE LIRQTRIPFS GEPVSNLQIM GMLETRALDF ERIIILSVNE GVIPQAKRQN SLIPFDAAQA VGLPTHQHQE AVMSYHFYRL LQRASEVHIL YTSTNDAPGG GEKSRFVRQI EYELAQYNPL IRIENKTVVF EAQARQELEE VVHKDDALIA AIRAYLDGKG IYPTHLNEFI RCSMQFYLKH IAGVKEKEEV EEELGMDKIG TWLHASLERL DLEFFLLDKD PSEEEIVQVL REEFDRLFKG YVTNLGLNRI YYQIGEQQIL TFLRHHMAQK PRRQILAAEQ PLHTRIQLVL QGAFTPVRLG GKIDRIELGE DGILYVMDYK TGSVELTGKQ KLADPVAREE VIRADPDRKM GYVRQLWIYE YLMYRRMKEE NGLKLRGNTY NFGEYAVKSG FYSFRDPKNL IANPLELTDQ LAPGEFIEKS EVILTDILNV MLDPDVPFRK TDDLTTCKFC DFTGICGR
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