| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2353 |
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| Symbol | |
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| ID | 8225925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 2906730 |
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| End bp | 2909795 |
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| Gene Length | 3066 bp |
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| Protein Length | 1021 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644930186 |
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| Product | signal transduction histidine kinase, LytS |
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| Protein accession | YP_003086737 |
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| Protein GI | 255036116 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCTG GCAGATGCTG GAAATCTTTG CTGCTGTGCA TTCAGCTATT GGCCGGTTGG
GTGCATGCAC AGGACCGGGT CTTCGAGGTG AATCAATACG ACGAGCGCCA GGGGCTCAGC
AGCCGGCTGG TGCATTGCAT GATCCAGGAC AAAAAAGGAT TCCTATGGCT GGGCACATCC
GACGGGCTGA ACCGGTATGA TGGTCACGGC TTCATCACGT TTCGGAGCAG CGCCGATAAC
CCCAAAAGCA TGGCCGGCAA CTACATCACC GCTTTGGCAG AAGATCTGAA CGGCAACATA
TGGGTGGGCT TCTACACCGG CGGGATCAGC TGTTACAATC CGGTGCGCGG CCAGTTTACC
AACTACGAGA TGACCGACGT GCAGGGCCGG GACCTGTCAG GCGAAGAAGT GAAAATGCTG
TATATCGATC GTCAGAATAC GGTCTGGACC AGCATTAAGG GAGAAGGGCT CATACGATTA
GACCAGGCCG GCGGAAAGCA CAGGCAATAT AACATTGTAG AAACAGCGAC CGGAATAAAC
CAGCCCGAGT ACCGCAAAGC TTTCAACATC GTCTACCGCG TTTACGAGCA GCCGGGCGGC
CGCTTTTACC TGCTCACGCA CACTGGTTTG TATTTATTCA ACAAAACGAG CGGCAACTTG
AACGCCATTC CCGACCCGGA TGCAAGCGGG CACCTGGTGC CGCAGAACCT GTTCATTTCC
TATACAGTAG AAGATGACGT GCTTTGGCTG GGCTCTTGGG CCGGGGGCCT TGCTGCTTTC
AACATAAAAA CCGGCGGATG GAAGCGCTAC CGGTTTGACC CGCGCATACT CCCTACGACC
AACATCATTT CTGGCATTCA CCATTCCGGC AGCGATACCT TGTGGCTTAC TTCCATTGAC
CGGGGGTTTG GATATTTTGA CAAGAAAAAG GAGGAATTTG TTTTTCTGGC TGGCAAACAG
GGGTTTCCCA CCGGTTCCTA TAATGGCCTT TTGGCCGATC GGGAAAATAA CCTTTGGCTC
AATACCGAGA ACATGCTTGT TGCCGCATTC CGGCAATCCA AACCATTCAC CTTTGTGCCG
GTCAATGTTA AAAAACGTGA CCATTCCGTA TTTCATTCCA TTACTTCCAT TATCGAAGAT
GATCATTTCA AGCTAACGGC CACCCTTTGG GCCGATGGGC TGCAAGTGCA CAACAAGAAA
ACCGGGGTGA CGAAAGCATT GGGTGTCGAC ACGCACATGG ACGAGCCCTT GCAGCGGGTG
AATAACATTT GGAAGGACAA GAGCGGAACG GTCTGGGTGA TTTCGCGGGA TGTCATTTAT
ACATTCGATC CCGTGCGGGA AACGCTGGTC AAAATCCCGC AACCGCCCGC ATGGACGGCA
GAGAAGCCCA GCAATTTCTT TTTATCCATC CGGCAAGACA AGGCAAACAC GTTTTGGATA
GCCACCGCAA GAAACGGCCT GTTCAGGTAC GACCCGCGCA ATGCGAAATA CACGCATTAC
GCACCTTCGG CCACAAGACC GATCGCGACT CGGCTGATTT CGGCCATCGA TACCGACGAG
TACGGCACGC TTTGGGTGGC GGGCAAAAAC GGGTATCTGG CGTTTTACGA TCAGAAACAG
GACGCATTCC TACCGGTGCC GGTGGCCTAC AAGGACCGAA AGGCTAAGAG CGTGAGCTCG
GTGTTCTGTC AGCCGGGCGG ACGCTTGTAC GTAGGTACGG AGCTCGGCCT GCTGCTCTAC
GACATTTCAA AGTCCGAAAA ACGGCCTGTT AGTCTCTACA CTGGCAGTGA TGGCTTGAAA
GGCGATATCG TCAGCAGCAT GCAAAGCGAT CGGTCCGGGA AAGTTTGGTG TATTACTCAA
ACGGCGCTTT GTAGAATTGA TCCTTTAACG CACAGGATCA GTTCCTACGG GCTTTCTGAT
GGCATTACCA AGCCCGACAT CGGCTACGGG ATCAGTCATT TGCCCGGTGG TTTTCTGGCG
GTTACGGCCA ACAACGGCTA CTACCAGTTT CATCCGTTCA CCTTGCTCGG CCAGAAGGCC
GCAAAAGTGC CGGTGATCAC CTCATTCAAG GTCTATGGTC AGGAATATTA TTACCAGAAA
GAGCTTTCAC GCAATGGCTT TGTGCGCCTG GAACCCGACG AAAACAGCTT CTCCTTCGAG
TTTTCCGTTC TTGACTATAA AACACCCGAT GCCTATCAGT ATTTCTACAA ACTGGAAGAT
ATCGATGCGG ACTGGGTGCG AGCGGGGAGC CGCAGGTATG TAGGCTACAC CAATATTCCC
GGCGGCCGCT ACAATTTCCG GGTGAAAGCG GCCATTCATC CCGACGATCT CACGCAAGCC
GAGCTTACCA TACCCTTTTA CGTCGAAACG GCCTTCTACA ACACCTGGTG GTTCAGAATT
GCGGTTATGA TTTTCCTGGC AGGCCTTGGA TTTCTTTATT ATCAAAATCA AATACGGAGC
AAGTCGCGGA TTTACGGGTT GCAAAGCCGG GCGGCAACGC TTGAAAAAGA AAAGGCGATG
ATCATGTACG AAAGCCTTAA ACAACAGCTC AACCCCCACT TTCTGTTCAA TTCGCTCACA
TCACTGGGAA GCCTGATCTG GATCGACCAG AAGCTTGCCA CCCGGTTTTT GGAAAGCCTG
GGCAAAATGT ACCGCTACAT TCTGCAAAAC AGGGATACCG AGCTGGTGCC ACTGGAAGAC
GAGATCCGGT TTGTGCAGAT GTACATTGAC CTGCAGCAAA CCCGATTCGA GCAAAGCCTG
CTGGTGACTT TTGATGTCGA TCAGCAGTTA TTGAATCTCA AAATCGTGCC TGTAACCCTT
CAAAATCTGA TTGAAAACGC GATCAAGCAC AACATCATTA CCATCGAAGA CCCACTGAAA
ATCTGCATTT ACACGCAGCA GACCTGGCTA GTCGTCGAGA ATAACCTGCA AAAGAAAAAC
TTCGTCCAGA CCAGCAACCG ACAAGGGTTG GCCAGTCTGG TTTCGCTGTA CCGCTACCTG
TCGCAGCGGC CCGTGGAAAT CGAGGAAACG CCCAACGCAT TTAAAGTAAA AATCCCCCTG
ATATGA
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| Protein sequence | MKPGRCWKSL LLCIQLLAGW VHAQDRVFEV NQYDERQGLS SRLVHCMIQD KKGFLWLGTS
DGLNRYDGHG FITFRSSADN PKSMAGNYIT ALAEDLNGNI WVGFYTGGIS CYNPVRGQFT
NYEMTDVQGR DLSGEEVKML YIDRQNTVWT SIKGEGLIRL DQAGGKHRQY NIVETATGIN
QPEYRKAFNI VYRVYEQPGG RFYLLTHTGL YLFNKTSGNL NAIPDPDASG HLVPQNLFIS
YTVEDDVLWL GSWAGGLAAF NIKTGGWKRY RFDPRILPTT NIISGIHHSG SDTLWLTSID
RGFGYFDKKK EEFVFLAGKQ GFPTGSYNGL LADRENNLWL NTENMLVAAF RQSKPFTFVP
VNVKKRDHSV FHSITSIIED DHFKLTATLW ADGLQVHNKK TGVTKALGVD THMDEPLQRV
NNIWKDKSGT VWVISRDVIY TFDPVRETLV KIPQPPAWTA EKPSNFFLSI RQDKANTFWI
ATARNGLFRY DPRNAKYTHY APSATRPIAT RLISAIDTDE YGTLWVAGKN GYLAFYDQKQ
DAFLPVPVAY KDRKAKSVSS VFCQPGGRLY VGTELGLLLY DISKSEKRPV SLYTGSDGLK
GDIVSSMQSD RSGKVWCITQ TALCRIDPLT HRISSYGLSD GITKPDIGYG ISHLPGGFLA
VTANNGYYQF HPFTLLGQKA AKVPVITSFK VYGQEYYYQK ELSRNGFVRL EPDENSFSFE
FSVLDYKTPD AYQYFYKLED IDADWVRAGS RRYVGYTNIP GGRYNFRVKA AIHPDDLTQA
ELTIPFYVET AFYNTWWFRI AVMIFLAGLG FLYYQNQIRS KSRIYGLQSR AATLEKEKAM
IMYESLKQQL NPHFLFNSLT SLGSLIWIDQ KLATRFLESL GKMYRYILQN RDTELVPLED
EIRFVQMYID LQQTRFEQSL LVTFDVDQQL LNLKIVPVTL QNLIENAIKH NIITIEDPLK
ICIYTQQTWL VVENNLQKKN FVQTSNRQGL ASLVSLYRYL SQRPVEIEET PNAFKVKIPL
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