| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2345 |
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| Symbol | |
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| ID | 8225917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 2898750 |
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| End bp | 2901980 |
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| Gene Length | 3231 bp |
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| Protein Length | 1076 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644930178 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_003086729 |
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| Protein GI | 255036108 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.818037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTACA CCGAATTACA GGTAACCAGC AATTTCAGCT TCCTTCGTGG GGCTTCGCAT
CCGGAAGAGC TCGTCGAGCA GGCGATGCAC TTTGGCTATA CGAAAATAGC CATCACAGAC
CGGAACACGC TGGCAGGGAT TGTGCGCGCG CATTCGGCCG CACGCGGCAA AGGGTTTGAG
GTCATCCCAG CCGCGCGGCT GGATCTGATC GATGGGCCCA GCCTTCTGGC CTACCCGACG
GATAAGCCCG CTTACGCGCG GCTTTCGGCG CTGTTATCAC TGGGAAACCG AAGGACTGAA
AAGGGAAAAT GCGACCTGTA CCGAAGGGAT GTGTATGAAC ACGCCGAAGG GATGAAGTTC
GTTGCCGTCG CGCCGGTGAC ACTAAATGCA TCCTTTGAAT TTGAACCGGG CTTTGAAAGG
GCGCTGCGCG AATACCGCTC CGAGCTGGGC AGTGAGCTTT ACCTGGCTGC TACCCGCTCC
TACGTGGAAA GCGATGTCAA AAAGTTCTTC CGGCTGTCCG AAATCTCAAA GCGCCTGGAT
GTACCGCTGG TGGCCACCAA CGATGTGCAT TACCATCACC CGGAGCGCCG GCAGCTGCAA
GACATCGTTA CCTGCGTGCG CGAGAAATGC ACGATCTACA ATGCCGGCTT CCGGCTGCAC
CAGAATGCGG AGCGCTACCT GAAAGACCAG GCAGAGATGC TGCGCATCTT CCGCGGGTAT
CCGGATGCCA TTGCCCGCAC GCAGGAAATC GCAGAAGCCT GCACCTTCTC ACTGGACACC
TTGCAATACG TGTATCCGGA AGAGATCACC GGCGGCGACC GCAGCCCGCA AGAAGAACTG
ACCTACCTGG CCTGGAAAGG TGCCAGGGAC TTTTACGGGG AGCCGGTGCC TGAGAAAGTT
GCCAGCGCCA TCGAGCATGA GCTCAAATTT GTAGCCGAAA TGGATTATGC GGCTTATTTT
CTGACAGTTT ACGATATTGT CCGTTTCGCT CGTGAGCGCG GCATCCTTTG CCAGGGCCGC
GGCTCTGCGG CCAACTCGAC CGTCTGCTTC TGTCTTGGGA TCACCAGCGT TGATCCTACC
AAATTTGATC TGCTCTTTGA GCGCTTCATT TCATCAGCCC GTAACGAGCC GCCGGATATC
GACGTAGACT TTGAGCATGA GCGCAGGGAA GAAGTGATCC AGTACATCTA CCAGAAATAC
GGCCGTGACC GCTCAGCGAT CGTGGCCACT GTCACCCAGC TGCACCAGAA AGGCGCTGTG
CGCGATGTGG CCAAAGCGAT GGGCATGTCC GTGGATGCGA TAAACAAACT ATCCAGCTCG
ATCTGGGAAT TTACCGATGA GTGGTTTGAA GGAAAACGGA TTTCGGATCA AGGCTTTAAC
GCGAGTGACC CGCACCTTAT GAAAGTGGCG GATCTGACCA AACAGTTCAT GGGCTTTCCG
CGGCAGCTGG GCCAGCATAC CGGCGGGTTT GTGATCACCC AGGGCAAGAT CACTGACCTT
TGCCCGATCA TCAACGCCCG GATGGAAGAC CGCACCAATA TCGAATGGAA CAAAGACGAT
ATCGATACGC TCGGCTTTCT GAAAATTGAT GTGCTTGCCC TGGGCATGCT TACCTGTATC
CGCAAAGGCT TTGACCTTTT AAGAAACCAT TATGACAAGA CCTACACGCT GGCGACTATC
CCGCAGGATG ATCCGAAGGT GTATGAGATG ATCTCGCATG CCGATACGAT CGGGGTTTTC
CAGATCGAAA GCCGGGCGCA GCAGTCGATG CTGCCCAGGC TTAAACCAAA AAACTTCTAT
GACCTGGTAA TCGAAGTCGC CATCGTCCGG CCGGGTCCGA TCCAGGGGGA TATGGTGCAC
CCCTACCTGC GCCGCAGGAA CGGGGAAGAA CCGGTAGAAT ATCCTTCCAA GGAGCTGGAA
GACATTCTCG GCCGCACGCT GGGGGTGCCC CTGTTCCAGG AGCAGGCGAT GAAGATCGCG
ATCGTGGCGG CCGGCTTCAC TCCTGCCGAA GCCGATAAGC TCCGGCGCAG TATGGCGACC
TTTAAGCTCA ACGGGCTTGT CACCCAGTTT GAAAAGAAGC TGATTGATGG GATGACCGGA
CGTGGCTATA CGGAAGAATA TGCGCGCCGG ATCTTCCGGC AGCTGGAAGG GTTCGGTAGC
TACGGGTTTC CTGAAAGCCA CGCGGCCAGC TTTGCGCTTT TGGTCTATGT CTCCTGCTGG
ATGAAGTGCT ACTATCCCGA TGTATTCGCG ACAGCGCTGT TGAACTCTCA GCCTATGGGC
TTCTACCAGC CCGCACAAAT TGTCATCGAC GCGCGTAAAC ATGGGGTTAA GGTGCGGCCG
GTGGATGTGA ACATTTCCAG CTGGGACAAT ACGTTAGAGG AACCAGAAGG GGAATATAGG
GCGATCAGGC TGGGCTTCCG TCAGGTGAAA GGGCTTGCGA AAAAGGACGC TTTGGCCCTT
TTGGCGGGGC GCACCGGGCC CTATAAGGCC ATTCATTTGA TGCGGGACGC TGGGGTCTCC
CAAGAGGCGC TGGAAAAGCT CGCTGACGCG GACGCCTTCC GCTCGATGGG CATGGACCGG
CGTCAGGCGA TGTGGGAGGC CTCTGCCCTC TCCGAACGGC CGATGGGCGC TTTTGCGGGC
CACAAGTCAG CCAGCGAGTT TGAAGCGCCC GTCGAGCTTC CCAAGCTCTC GCTTTCCGAG
CATGTCGTCC AGGATTATAT GTCCACCTCG CTTTCGCTGA AAGCGCACCC GGTTTCGTTT
GTCCGCCAGG ATTTGGTAGC GAAAAGGGTG ATCAAGACTG CGGATCTTGC GGGGTTGCGC
GATAAACAGT TTGTCCGGGT AGCAGGCCTG GTGCTCGTGC GCCAGCGGCC AGGTACTGCC
GGCGGGGTCT GCTTTATCAC CATCGAGGAC GAGTCGGGCG TGGCTAACCT GGTCGTGTTT
CAAAGCCTTT TCGAGAAATA CCGTAAGGAG ATCCTCCGGT CGCGGCTTTT GATGGTCGAA
GGAAAGCTGC AAATCGAAGG GGAAGTGATC CATGTGGTCG TCCGGCGCTG CTATGATATG
TCCCCGCTGC TGCGAAATCT TAATCAGAAA GATGAAGATC CGGATCTGCT TACGTTATCG
CGCGCCGACG AAAAAGACGA ATATGTATCC CAGGCTGTTA ACCGCAAAAC ACAGGTCCGA
AAAAAGGCGG TGCAATTGGA AATCTTTCCT TCCGGCCGTA ATTTCCGTTA A
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| Protein sequence | MQYTELQVTS NFSFLRGASH PEELVEQAMH FGYTKIAITD RNTLAGIVRA HSAARGKGFE
VIPAARLDLI DGPSLLAYPT DKPAYARLSA LLSLGNRRTE KGKCDLYRRD VYEHAEGMKF
VAVAPVTLNA SFEFEPGFER ALREYRSELG SELYLAATRS YVESDVKKFF RLSEISKRLD
VPLVATNDVH YHHPERRQLQ DIVTCVREKC TIYNAGFRLH QNAERYLKDQ AEMLRIFRGY
PDAIARTQEI AEACTFSLDT LQYVYPEEIT GGDRSPQEEL TYLAWKGARD FYGEPVPEKV
ASAIEHELKF VAEMDYAAYF LTVYDIVRFA RERGILCQGR GSAANSTVCF CLGITSVDPT
KFDLLFERFI SSARNEPPDI DVDFEHERRE EVIQYIYQKY GRDRSAIVAT VTQLHQKGAV
RDVAKAMGMS VDAINKLSSS IWEFTDEWFE GKRISDQGFN ASDPHLMKVA DLTKQFMGFP
RQLGQHTGGF VITQGKITDL CPIINARMED RTNIEWNKDD IDTLGFLKID VLALGMLTCI
RKGFDLLRNH YDKTYTLATI PQDDPKVYEM ISHADTIGVF QIESRAQQSM LPRLKPKNFY
DLVIEVAIVR PGPIQGDMVH PYLRRRNGEE PVEYPSKELE DILGRTLGVP LFQEQAMKIA
IVAAGFTPAE ADKLRRSMAT FKLNGLVTQF EKKLIDGMTG RGYTEEYARR IFRQLEGFGS
YGFPESHAAS FALLVYVSCW MKCYYPDVFA TALLNSQPMG FYQPAQIVID ARKHGVKVRP
VDVNISSWDN TLEEPEGEYR AIRLGFRQVK GLAKKDALAL LAGRTGPYKA IHLMRDAGVS
QEALEKLADA DAFRSMGMDR RQAMWEASAL SERPMGAFAG HKSASEFEAP VELPKLSLSE
HVVQDYMSTS LSLKAHPVSF VRQDLVAKRV IKTADLAGLR DKQFVRVAGL VLVRQRPGTA
GGVCFITIED ESGVANLVVF QSLFEKYRKE ILRSRLLMVE GKLQIEGEVI HVVVRRCYDM
SPLLRNLNQK DEDPDLLTLS RADEKDEYVS QAVNRKTQVR KKAVQLEIFP SGRNFR
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