Gene Dfer_2285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2285 
Symbol 
ID8225857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2821103 
End bp2821624 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content48% 
IMG OID644930120 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_003086671 
Protein GI255036050 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGATT TCAGACAATT CAACAAAACG CCTGTTCTTG TACAGAACTT TCTGGTGCAC 
CTTCGCATCG GGAGGCAATC AGCCTCGTGT AAACATGACA TTACTTTTAA GCTGGAAACG
ATGCAAAAAC AAGCTTTTCT TACCCTGTTG TTGATACTTA CGTCAGTTAT TACATATGCG
CAGCAGACTG TTAATCGTAA AGATTTGCTC TCGGCGGGGG TGGCCAATCA AACGATTGAT
AATGTCCAGG CGAAAGAAAT CACCATGAAC CCGGGCCAGC GTGCGCCGCG GCATCATCAT
GCCTGCCCGG TGGTGGGCTA TGTCGTAAAG GGCACAATTC TCTACCAGAT CGAAGGCGGG
CCCGCAAAGA CACTCAACGA GGGTGAAGCT TTTTTTGAGC CTGCCAATAA GGTTATCACC
CACTTTGACA ATGCATCGGC AGATACGCCA GCCAAATTTG TTGCTTTCTA CCTCCGTAAT
GGGGAGCAGC CGCTGGTAGA AATATTGCCT GACCCAAAGT GA
 
Protein sequence
MMDFRQFNKT PVLVQNFLVH LRIGRQSASC KHDITFKLET MQKQAFLTLL LILTSVITYA 
QQTVNRKDLL SAGVANQTID NVQAKEITMN PGQRAPRHHH ACPVVGYVVK GTILYQIEGG
PAKTLNEGEA FFEPANKVIT HFDNASADTP AKFVAFYLRN GEQPLVEILP DPK