Gene Dfer_2206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2206 
Symbol 
ID8225778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2700444 
End bp2701490 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content57% 
IMG OID644930042 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_003086593 
Protein GI255035972 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACTATA ACGAAATTGA AAACCTGCTT CTAAAATACC GAGAGGGAAA GTGTACGCCC 
GCCGAGGTGG ATCGCATTCA CCAATGGTAT GAACAGGCAG ACAGCGGCAT GTCGCAAACG
GAGCTGACCG ACTCCGAAAA ATCGCTCCTT AAATCAAGAA TGTGGACAGC CATTCAGCAC
GACACACGCC CGCGCGGACG CACGGTTTCG AGGTGGGTAA CGGTGCGTAT GTATGCGTCC
ATTGCCGCTG CGGCGGTAGT CGTTTCGCTA TCCCTGGTCT ATTTTTTCTC TGCCAAACCC
GCTTCTCCGT CGGCTGCCAA GGGGCCATTG CTGTTGGAGC CTGGCCGGGA AGGCCTCGTG
GCTAAAAGCA ATCAGACCAG CCGGCGGATG GTCATCACAC TGGATGACGG CAGCCAGGTG
ACGCTCGCCC CCGGTGCCGC GCTGACCTAC CCGCGCCGGT TTTCCCCGGG CAAACGCGAG
GTGCAGCTCA AAGGCGATGC GTTTTTCAGC ATTATGAAGG ATAGTCAAAG GCCATTTTTC
GTGTACAGCG GAAAACTGGT CACCCGGGTG CTGGGCACGA GTTTCTGGGT AAAAGAGGGC
GGCGACGATC GCCAGATGCA GGTGGAAGTG GTTTGCGGCA AAGTGTCCGT ATTTGAAAAC
GAAAATGCCG AAGAGCCCGC TTCCGAAAAC CGCCACCAGT TCAACAAAGG CGTGATCCTG
ACCCCCAACC AGCGCGTGAC CTACTTTGAA GAAAGCGGGC ACCTGATGAC CAGCCTTGTA
GACAAGCCCG TGCTGCTGAC ATCGCCGGTA GACCAGCCGT CGGCCATTTA CAAAAACGTG
GCGCTGCCCA GCATTTTTGA ACGATTGGAA GCTGCCTATG GCGTGGATAT CGTGGTTTCG
GGCGAGGCTG TGAACGAATG CACATTCACC GGCGACCTGA CCGACATGTC GCTGTTCGAT
CAGCTGGACC TGATCTGCCA GTCGAACGAC GGCTCTTATC AGGTGCAGGG AACGCGTATC
CTGGTCTCAG CGGCCGGTTG CAGATAA
 
Protein sequence
MNYNEIENLL LKYREGKCTP AEVDRIHQWY EQADSGMSQT ELTDSEKSLL KSRMWTAIQH 
DTRPRGRTVS RWVTVRMYAS IAAAAVVVSL SLVYFFSAKP ASPSAAKGPL LLEPGREGLV
AKSNQTSRRM VITLDDGSQV TLAPGAALTY PRRFSPGKRE VQLKGDAFFS IMKDSQRPFF
VYSGKLVTRV LGTSFWVKEG GDDRQMQVEV VCGKVSVFEN ENAEEPASEN RHQFNKGVIL
TPNQRVTYFE ESGHLMTSLV DKPVLLTSPV DQPSAIYKNV ALPSIFERLE AAYGVDIVVS
GEAVNECTFT GDLTDMSLFD QLDLICQSND GSYQVQGTRI LVSAAGCR