Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2136 |
Symbol | |
ID | 8225708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 2605989 |
End bp | 2607401 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644929973 |
Product | RagB/SusD domain protein |
Protein accession | YP_003086524 |
Protein GI | 255035903 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.528291 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGAA TCATAAAATC AATCACACTT GCCGCGCTCA TCGCCACCAG TTGGGGCTGC AAGGATTCAT TCCTCGAACT GGCGCCGGTT TCAAACCCCA GTGCGGAGAA TTTTTACAAA ACGAAGTCGG ATTTCGACAT TGCTGCCAAT GCAGCCTACA ACACGCTTTA CACCGTGTAT CATCCGCAGG GGCCGGTTTC CTATGCCGGC GAGCTGATGT CCGACAACGT GACGATCTTC AACATTTCGG GTAACCAGGC CGATAAATGG CAGTTCCGCG ACTACACGCT GGCGCCTGCA AACACGATGG TGTACCAGTT CTGGCAGGAT TTCTACCGGT CGCTTTACAA CATCAATATC ATCCTCGAAA AGATTGAGAA TGCCGATCTC GACGCGACGT ACAAGGCTCA AACACAAGGC GAAATGCTGT TCCTGCGCTC ATTGTACTAC TATAATATGG TGCAGCTTTG GGGGGATGTG CCGCTGGTGA CGCGTCCGGT GAGTGCCGCA GAAGCTTATG AAATCCTTCG CACGCCCGCC GCGCAGATTT ATGCGCAGAT TACCAAGGAT TTGGCCGATG CGAAGTCTAA ACTGCCGGCA TCTTCTGCCA TCGCCGGCCG GGCCACCAAA GGCGCCGCGC AAACGCTGCT CGGTAAAGTG TACCTGGCTG TGGGTGATAA AGCCAATGGC GTGAAGGAGT TAAAAGAAGT GTATGATAGC AAACAATATG AACTGTTGCC CTCGTACGCA TCGCTTTGGG ACCCTAAAAC GAAGAATACA AAAGAGTCGA TCTTCGAAAT ACAATTCCTT GGTGGCTCCG CCACATTGCC TTACAGCAAT TATTACCTCG AATTTTTCCC TAATTCCAAT GCATTGGGCT TCTATGGCGC GGGCATGAAC CAGGTCGTGG AGGACATTTG GAATGAGTAC GAAAAAGGCG ACAACCGCCG CGAGGCTTCC ATCGATACGG GCTTCACCGA CGCGAAAGGC AACTTTACCA AAGCCAAATT TCCGAAAAAA TGGCAGGATA AGTCGGCCCC GCTGATCAAC CAGAACATTG CGGCAAACAA CAATTTCATG GTATTGCGCT ATGCCGACCT GCTCCTGCTG CTCTCGGAAG CGACCGGCGA CCCGGTTTAC CTGAACGAGG TCCGCAAACG GGCCGGATTG CCATTGTACG GTGCCGCGGG CTATCCTGCC CAGTACAATA CGATCGCGTT GGCCGTCGAA CATGAGCGCC GCGTGGAGCT GGCATTCGAA TTCCACCGTT GGTTCGACCT GAAACGTACC GGCCGCGTCA TCGACGTGCT GACCGCGAAA GGAAAGCCGG TAACGCAAAA CAAATTGGTG TTCCCGATCC CGAATATCGT GCGGGACCAG AATGCGAAGA TTACACAGAA TGCTGGATAT TAA
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Protein sequence | MKRIIKSITL AALIATSWGC KDSFLELAPV SNPSAENFYK TKSDFDIAAN AAYNTLYTVY HPQGPVSYAG ELMSDNVTIF NISGNQADKW QFRDYTLAPA NTMVYQFWQD FYRSLYNINI ILEKIENADL DATYKAQTQG EMLFLRSLYY YNMVQLWGDV PLVTRPVSAA EAYEILRTPA AQIYAQITKD LADAKSKLPA SSAIAGRATK GAAQTLLGKV YLAVGDKANG VKELKEVYDS KQYELLPSYA SLWDPKTKNT KESIFEIQFL GGSATLPYSN YYLEFFPNSN ALGFYGAGMN QVVEDIWNEY EKGDNRREAS IDTGFTDAKG NFTKAKFPKK WQDKSAPLIN QNIAANNNFM VLRYADLLLL LSEATGDPVY LNEVRKRAGL PLYGAAGYPA QYNTIALAVE HERRVELAFE FHRWFDLKRT GRVIDVLTAK GKPVTQNKLV FPIPNIVRDQ NAKITQNAGY
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