Gene Dfer_2124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2124 
Symbol 
ID8225696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2591707 
End bp2592657 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content52% 
IMG OID644929961 
ProductMonosaccharide-transporting ATPase 
Protein accessionYP_003086512 
Protein GI255035891 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACCA GCATTCGCAT AGCGTTTTTT TGCATCCTTT TCGGGTTTGG ATTTTTAGGT 
TGTAAAACAA AAGAATCCAA GGACGAGCCG AAGAAGATTG CGATCGTGAT TTCGACATTG
AACAACCCGT GGTTCGTTTT CCTTGCCCAA AAAGCCGAGG CGAAAGCGAA ACAGCTGGGC
TACGAATCCA AAATTTTTGA TTCCCAAAAT AATACTGCCC AGGAAACCGA CCATTTCGAC
AATGCGATAG CCTCGGGTTA CGATGCCATT CTGTTCAATC CGACGGACGC CGATGGCTCC
ATCGTGAATG TGAAAAATGC GGTTTCCGCG GGCGTGCCGG TGTTTTGCAT GGACCGGGAG
GTGAATGCCA ATGGCGTGGC CACGTCTCAG ATTCTGTCGG ACAGCTATTC CGGCTGCGTG
GCGATTGGCA AGTACTTCGT GGAGACGTTG AATAAGAAAG GAAAATACGT CGAAATCCTC
GGGATGGTGG GCGATAACAA TACCTGGAAC CGCTCGAAGG GCTTTCACAG CGTGGTGGAT
TTTTACCCGG GGTTGAAAAT GGTCGCCCAG CAAAGTGCTG ATTTTGACCG TAATAAGGCC
ATGGAAGTGA TGGAGTCGCT GCTGCAAGCG CACCCGGATA TCGACGGCGT GTTCTGCGGC
AACGATGCGA TGGCCATGGG TGCTTACCAG GCCTTGGTAG CCGCCGGAAA GGCCGATCGC
GTGAAGGTTT TCGGCTTCGA TGGGGCGGAG GATGTGGTTA AGTCCATCAA CGACGGCAAG
ATACTGGCAA CCGGAATGCA GTTCCCGGAA GTAATGGCGC AAACCGCCGC CACATTTGCC
GACGAGTATT TCAAAGGCAA ACGCGATTTC CCTGGTAAAA TGCCGGTGGC CGTGGAGCTG
GTGCGCAAGG ACAATGTCGA AAATTATGCC GCTTACGGCG AAAAAGAATA G
 
Protein sequence
MNTSIRIAFF CILFGFGFLG CKTKESKDEP KKIAIVISTL NNPWFVFLAQ KAEAKAKQLG 
YESKIFDSQN NTAQETDHFD NAIASGYDAI LFNPTDADGS IVNVKNAVSA GVPVFCMDRE
VNANGVATSQ ILSDSYSGCV AIGKYFVETL NKKGKYVEIL GMVGDNNTWN RSKGFHSVVD
FYPGLKMVAQ QSADFDRNKA MEVMESLLQA HPDIDGVFCG NDAMAMGAYQ ALVAAGKADR
VKVFGFDGAE DVVKSINDGK ILATGMQFPE VMAQTAATFA DEYFKGKRDF PGKMPVAVEL
VRKDNVENYA AYGEKE