Gene Dfer_2045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2045 
Symbol 
ID8225617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2490612 
End bp2491559 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content52% 
IMG OID644929882 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_003086433 
Protein GI255035812 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0682839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACGT CTACAAAAAC TCCTTCAACA TTCATGGTGG TACTGGCATT CGCCACCGTT 
TACATCGTTT GGGGATCAAC CTACTTCTTC ATTCAGAGGG CATTGGAGGG TTTTCCGCCA
TTCTTCCTGG GTGCATTCCG CTTCATCATC GCCGGCCTGC TGATGCTCGG ATGGAGCCTT
TTGCAAGGCG AACAGGTATT TTCCTGGAAA GTAATGAAGC CCGCCCTCAT AACGGGTTTG
CTGCTGCTTT TTGTGGGTAA CGGCGTGGTG ATCTGGGTGG AACAATTCCT GCCTAGCGCG
ATGGTGGCGA TCATGGTGTC GTCGGCGCCG CTGTGGTTTG TGCTTTTGGA TAAGCCGAAA
TGGTCGGAGA ACCTGAGCAA CAAATCGACA ATTCTCGGCC TGGTGGTCGG TTTTGCCGGC
GTGATCTTGC TCTTTTATGA GAAAATAATG GCCACAATGT CGTCGCTGAA CAGCGGCCGC
GATCTTTTTG CGATGGCGCT GGTCGTGCTG GGCTCGATGG CCTGGGCGGG CGGTTCGCTG
TACTCAAAAT ATAATTCTGT TTCCAAATCG GCCACCGTCA ATTCGACATG GCAAATGCTG
GCGGCCGGCA TTGCGTTCAT CCCCGGAACG TTGCTAACGG GTGAATACAC GTCGGTTGAC
CTCACCGCAA TCCCGCTGAA TGCATGGCTG GCAACGACCT ACCTGATCGT ATTCGGTTCC
ATTGCGGGTT TCAGCGCTTA TGTGTGGCTT TTGAAAGTCC AGCCTGCCAC CAAGGTGAGC
ACCTATGCCT ACGTAAATCC CGTGGTGGCG GTGTTGCTAG GCATTTTCTT CGCCCACGAA
ACGATTACCA TGATGCAAAT CGCGGGGTTG GTAGTGATTT TGGGTAGTGT TCTGTTAATT
AATTTGCATC AATACAGAAA ACCTAAACAA GTAACTGCTA CCTGCTGA
 
Protein sequence
MQTSTKTPST FMVVLAFATV YIVWGSTYFF IQRALEGFPP FFLGAFRFII AGLLMLGWSL 
LQGEQVFSWK VMKPALITGL LLLFVGNGVV IWVEQFLPSA MVAIMVSSAP LWFVLLDKPK
WSENLSNKST ILGLVVGFAG VILLFYEKIM ATMSSLNSGR DLFAMALVVL GSMAWAGGSL
YSKYNSVSKS ATVNSTWQML AAGIAFIPGT LLTGEYTSVD LTAIPLNAWL ATTYLIVFGS
IAGFSAYVWL LKVQPATKVS TYAYVNPVVA VLLGIFFAHE TITMMQIAGL VVILGSVLLI
NLHQYRKPKQ VTATC