| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2039 |
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| Symbol | |
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| ID | 8225611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 2484697 |
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| End bp | 2486529 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644929876 |
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| Product | cysteine desulfurase, SufS subfamily |
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| Protein accession | YP_003086427 |
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| Protein GI | 255035806 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACAA ATATTGAAGG ATTTCCGGAA GGGCTGCCAG ACGGCATCCC AAATGGTTTC
CCAGACGGTT CTTCGGTCAA TTCGCCCGAT GCCGGCGCTT TGGAACGGCT CGCCAACGAG
CTTTTCAAAG CTATGCCGGG CGAAATGCCG TCGCCCGCAT TCTCGCCGCA TTTGGAAGAC
CATCCGAGGG CGCAAAAAAT GCTGGGTATC ATTCAGCAGG AGTTCGATCG CGGGCAATCG
CATTCGTCGG GGCATCAGCG TTTTCATGGC TGGGAATCGC ATTCGTCGGG ATATCAGCGT
TTTGATCGCG GCCCTTCGCA CGGACATCAG AACTTTGATC TGAATGAACC GCAGACCAGC
CTGCCCGACC CGCATTTCAC GGATGGCAAG GTGCCGCCAT CGGCTGCGGG AGTAGGGGTG
TCGCCGGGCG ATGCGTTGCC CTCTTACTAT TTTTTGAATG AAACCTTTGC CGAAAAGCCG
CATATTCCGG GTGCTTCCAA TTTTTTGCCG CATAGTTTTT CACCGTTTTC GCTGGGTAAT
ATACATGTTG GCAGCGACCG TGACCAGCTG GGGCGTGCCG TTCAAAGCCC GATCGGGCGC
ATTCCGTTTG ACGTAAACCG CGTCCGGGCC GACTTTCCGG TGTTCAGGGA ACGGGTGAAT
GACAAACCGC TTATCTGGTT CGATAATGCG GCAACTACCC AGAAGCCGAA ACAGGTGATC
GACCGGATCA GCTATTTTTA CGAGCACGAG AATTCCAACA TCCACCGCGC CGCGCACGAG
CTCGCCGCCC GCGCCACGGA CGCCTACGAG GCCGCGCGCG AGAAGGTGAG GGCATTTGTG
AATGCACGCT CGGTGAACGA GATCGTGTTT ACGAGGGGAA CCACCGAAGC CATTAACCTC
GTGGCCAAAA CCTGGGGCGA CCAGAACCTC CATGCGGGGG ACGAAATCAT CGTAAGCCAC
CTCGAACACC ACGCCAACAT TGTTCCCTGG AAGCAATTGG CGGACAAAAA AGGCCTGGTA
CTGCGCGTGA TCCCCGTCGA CGACGACGGC CAGATCCTGC TCGATGCATA CGCAGGCTTG
CTGAACTCCA AAACCAAACT CGTATCGTTC ACTCAGGTTT CCAATGCATT GGGAACGGTG
ACGCCCTCGT CGGACATCAT CCGCATGGCC CATGCGGCCG GTGCGAAAGT GCTCCTCGAC
GGCGCGCAGT CGGTGTCGCA CATGCGGACG GACGTTACCA TGCTGGATTG CGACTGGTTT
GTATTCTCGG GGCACAAGGT ATTCGGGCCA ACGGGAATCG GTGCATTATA TGGAAAGGAA
GACATTCTCA ATGCCACACA GCCGTGGCAG GGTGGGGGCA ATATGATCGT GGACGTCACA
TTTGAGCACA TCCGATACCA CAACGCACCT TCCCGATTCG AGGCGGGTAC CGGCAATATT
GCCGACGCCG TGGGGCTGGG TGCCGCATTG GATTATGTGA ACCGGCTTGG CATCGAAAAC
ATTTATAATT ACGAGAGTTT CCTGCTCGAA TATGCAACAG GCCTGATCAA ACACGTTCCG
GGCCTGCGGC TGATCGGCAC GGCGAAGCAC AAAGCATCGG TTTTGTCATT CGTTTTGGAT
GGGTATAAAA CCGAGGAAGT CGGTGCGGCG CTGAATAAGG AAGGCATCGC CGTGCGCTCA
GGCCACCATT GTGCGCAGCC CATTCTCAGG AGGTTCGGCC TTGAAACGAC GGTGCGTCCT
TCGCTGGCAT TTTACAACAC CTGTGAGGAA ATTGACGTAC TGATAGGCAC GCTGCACCGG
CTCGCAGCAA GCGGCAGGGG CCGCAGAGCA TAA
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| Protein sequence | MSTNIEGFPE GLPDGIPNGF PDGSSVNSPD AGALERLANE LFKAMPGEMP SPAFSPHLED
HPRAQKMLGI IQQEFDRGQS HSSGHQRFHG WESHSSGYQR FDRGPSHGHQ NFDLNEPQTS
LPDPHFTDGK VPPSAAGVGV SPGDALPSYY FLNETFAEKP HIPGASNFLP HSFSPFSLGN
IHVGSDRDQL GRAVQSPIGR IPFDVNRVRA DFPVFRERVN DKPLIWFDNA ATTQKPKQVI
DRISYFYEHE NSNIHRAAHE LAARATDAYE AAREKVRAFV NARSVNEIVF TRGTTEAINL
VAKTWGDQNL HAGDEIIVSH LEHHANIVPW KQLADKKGLV LRVIPVDDDG QILLDAYAGL
LNSKTKLVSF TQVSNALGTV TPSSDIIRMA HAAGAKVLLD GAQSVSHMRT DVTMLDCDWF
VFSGHKVFGP TGIGALYGKE DILNATQPWQ GGGNMIVDVT FEHIRYHNAP SRFEAGTGNI
ADAVGLGAAL DYVNRLGIEN IYNYESFLLE YATGLIKHVP GLRLIGTAKH KASVLSFVLD
GYKTEEVGAA LNKEGIAVRS GHHCAQPILR RFGLETTVRP SLAFYNTCEE IDVLIGTLHR
LAASGRGRRA
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