| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1983 |
|---|
| Symbol | hppA |
|---|
| ID | 8225555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 2423739 |
|---|
| End bp | 2425973 |
|---|
| Gene Length | 2235 bp |
|---|
| Protein Length | 744 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644929820 |
|---|
| Product | membrane-bound proton-translocating pyrophosphatase |
|---|
| Protein accession | YP_003086371 |
|---|
| Protein GI | 255035750 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3808] Inorganic pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR01104] vacuolar-type H(+)-translocating pyrophosphatase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATCA TTACCTATTT AGTGCCGGCG TTAGGCCTTG TTGGCTTGCT GGTTATGTTC
TTCAAAAGAG GCTGGGTTGT CCGGCAGGAT GCAGGAACTC CCGAAATGAA AATCATAGCG
GACGCCATTG CGGACGGTGC CCTGGCCTTT CTGAAAGCCG AATGGCGTGT ACTCATTGTT
TTTGGTTTGA TTGTGAGTGT GTTACTGGGT TATTCCGGCA CACTGGTTGA AAATTCCAGC
GCATTTATCG GCATATCGTT CCTGGTAGGG GCGTTTATCT CCGCTTTCGC GGGTTATATC
GGCATGAATA TCGCCACCAA ATCGAACGTC CGCACAACGC AGGCGGCGCG TACAAGCCTT
ACCAAAGCGC TCGAAGTGTC GTTTACCGGC GGCTCGGTGA TGGGTATCGG CGTGGCGAGC
CTTGCAGTGC TGGGATTGGG CGGTTTGTTC ATTATCCTGT ATTCTACGTT TGTAGGCGAT
AGCACCGATG TGAACGGCCT TCCCATGGAG CGGGTGCTGG AAGTCCTCGC GGGCTTCTCG
CTCGGAGCCG AGTCGATCGC GCTTTTTGCG CGTGTAGGAG GGGGGATTTA TACCAAAGCC
GCCGACGTCG GCGCCGACCT CGTTGGTAAA GTGGAGGCCG GTATCCCCGA AGACGATCCG
CGCAACCCCG CCACCATCGC CGATAACGTG GGCGATAACG TGGGCGACGT AGCCGGTATG
GGCGCCGACC TTTTCGGTTC GTACGTAGCC ACCATTCTGG CCACGATGGT GCTTGGCCGC
GAGATTATCG CCGATGGAAC TGATAATTTC GGAGGCATCG CGCCGATATT GCTCCCGATG
GTTATTGCCG GTGTGGGATT GATTTCTTCC ATTCTCGGAA TGCTTCTCGT GCGTGTAAGC
AATGATCAGG GAGATGTCCA GGGTGCATTG AACCGCGGTA ACTGGGGGTC GATCATCCTG
GTCCTGGTGG TAAGTTACCC GCTTACATTG TGGATGTTGC CGGAAGGTAA CCTCAATATC
CGCGGGGTCG ATTTCACGGC CATGGATGTA TACTGGGCGA TCCTGCTGGG ATCTGTTGTC
GGTGCGATCA TGTCTATGGT CACCGAGTTT TATACAGCAA TGGGTAAGCG TCCGGTGCAA
TCAATTGTAA ATCAATCATC TACCGGCCAC GCAACGAACA TCATCGGAGG GCTTTCGGTA
GGTATGGAAT CGACCGTAAT CCCGACGCTT GTGTTGGCGG CGGGTATTTT CCTCAGCTAT
GAAATGGCCG GTTTGTACGG CGTAGCGATC GCCGCAGCCG GGATGATGGC CACCACAGCC
ATGCAGCTTG CTATCGACGC CTTCGGCCCG ATCGCCGACA ACGCGGGTGG TATCGCCGAA
ATGGCGCATT TGCCGGAAGA AGTACGCGGC CGTACCGATA TCCTCGATGC CGTTGGAAAC
ACCACCGCGG CAACCGGAAA AGGCTTTGCG ATCGCTTCCG CGGCTTTGAC GTCACTGGCG
CTTTTCGCGG CATTCTGCGG CGTAGCAGGC ATTAATTCCA TTGATATTTA CAAAGCGAAT
GTACTTTCAG GGCTGTTTGT CGGTGCGATG ATACCGTTCA TATTTTCGTC CCTCGCCATT
GCGGCGGTGG GTCGCGCTGC CATGAAAATG GTGGAAGAAG TGCGCCGCCA GTTTCGCGAA
TTGCCCGGCA TTATGGAAGG CCGCACCAAG CCCGAGTACG ATAAATGCGT CGCCATTTCT
ACCCAGGCGT CCATCAAGGA AATGGTCGCA CCCGGCTTGA TCGCGCTGAT CGTGCCCGTG
CTGGTAGGCT TCCTGTTTGG CCCGGAAGTA CTTGGCGGTA CGCTCGCAGG CGTGACGGTT
TCGGGTGTGT TGATGGGAAT ATTCCAAAAC AACGCCGGCG GCGCCTGGGA TAATGCTAAA
AAATCGTTTG AAAAGGGCGT GCTCATCAAT GGCGAAACCT ACTATAAGAA ATCCGAGCCG
CACAAAGCTG CGGTAACCGG TGACACGGTC GGTGATCCAT TCAAAGACAC TTCGGGCCCT
TCGATGAACA TCCTCATCAA GCTCATGTCG ATCGTCTCGC TCGTGATCGC GCCGCACATC
GGTGTAGGTA CCCACGAAAC GAGCGCCACC AAAGCCAATG ACAAAGTTCA GGTCGTAACC
GTCGCCAACA CCCCGGCCCA AGACGATGCA AACGACGCAG CCCCGGTAGT GCGGTTGGAA
CGAAAAGGAG AATAG
|
|---|
| Protein sequence | MSIITYLVPA LGLVGLLVMF FKRGWVVRQD AGTPEMKIIA DAIADGALAF LKAEWRVLIV
FGLIVSVLLG YSGTLVENSS AFIGISFLVG AFISAFAGYI GMNIATKSNV RTTQAARTSL
TKALEVSFTG GSVMGIGVAS LAVLGLGGLF IILYSTFVGD STDVNGLPME RVLEVLAGFS
LGAESIALFA RVGGGIYTKA ADVGADLVGK VEAGIPEDDP RNPATIADNV GDNVGDVAGM
GADLFGSYVA TILATMVLGR EIIADGTDNF GGIAPILLPM VIAGVGLISS ILGMLLVRVS
NDQGDVQGAL NRGNWGSIIL VLVVSYPLTL WMLPEGNLNI RGVDFTAMDV YWAILLGSVV
GAIMSMVTEF YTAMGKRPVQ SIVNQSSTGH ATNIIGGLSV GMESTVIPTL VLAAGIFLSY
EMAGLYGVAI AAAGMMATTA MQLAIDAFGP IADNAGGIAE MAHLPEEVRG RTDILDAVGN
TTAATGKGFA IASAALTSLA LFAAFCGVAG INSIDIYKAN VLSGLFVGAM IPFIFSSLAI
AAVGRAAMKM VEEVRRQFRE LPGIMEGRTK PEYDKCVAIS TQASIKEMVA PGLIALIVPV
LVGFLFGPEV LGGTLAGVTV SGVLMGIFQN NAGGAWDNAK KSFEKGVLIN GETYYKKSEP
HKAAVTGDTV GDPFKDTSGP SMNILIKLMS IVSLVIAPHI GVGTHETSAT KANDKVQVVT
VANTPAQDDA NDAAPVVRLE RKGE
|
|---|
| |