Gene Dfer_1950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1950 
Symbol 
ID8225521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2386527 
End bp2387504 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content47% 
IMG OID644929788 
ProductIntegrase catalytic region 
Protein accessionYP_003086340 
Protein GI255035719 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.202643 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACTG ACAGCCTGAG AGCAGAAGCA AGGCAGAAAT GGGTTATGCT CTATAGACAG 
ATCGGAAACA TATCGGTTGC TGCCAGGAGG TGCGGAATTG CTAGATCTAC GTTACAACGT
TGGATAAAAC GTGAGGATGA AAATCTCTTT ACAGATCGGT CTCACCGTCC GCATCGGCTG
GGGCGACAAA AGTATCGTCC TGAAGACGAG GCCCTCGTAC TTAAGGTACG CGATGAATTC
AAGTATGGAA AACTCAGAAT CTGCTCTCAT CTGTTCAGGC TCCATGATTT GAAGATTTCA
ACTTCTACCG TAGCGAGAAT ACTCGAAAAG CATTCAGTTG CACCTATTCG TCGATTTACT
AAACATTCCC CTCCAATTCG ATATGCTAAG CTCGTTCCTG GCGAACGTGT ACAGTTAGAT
GTCTGCAAGA TCAGAGCTGG CCTGTATCAA TACACGGCGA TTGATGATTG TACCCGCCTA
AGGGTGTTGA AACTTTACAC GCGTCGGTCG GCCGCCAATT CAATCGATTT TCTGGACAAG
CTTATTGATG AATTTCATTA CCCCATTCAA CGTATTCAAA CGGACAGAGG ACAGGAGTTT
TTTGCGGTCG CATTTCAGCA GAAGTTGATG GATTACTGCA TCAAGTTTCG TCCCATAAAA
CCCAGGTCAC CACATTTAAA CGGCAAAGTT GAACGAAGCC AGCAGACAGA TCTCCAGGAA
TTTTACACAA CAGTTGACTT ACGAGACCCC CAATTGGACG ACAAACTCGC TCAATGGCAA
TTTCACTACA ATTACTTCCG CCCACACAGC TCGTTGGGCG GTAAGACTCC GATCGAATTT
GCCTCCGAAC ACTCTGCTAA GGCACCTTTC TGGGACGAAA TCGAGGCCAT ATACGACGAA
ACAAAGGAAC GCATTAGAGA ACAAGCCTAC TGGCGAGACC TGCGGATGGC AAAGTTGACT
AAGAAAAGCA AAACATAG
 
Protein sequence
MATDSLRAEA RQKWVMLYRQ IGNISVAARR CGIARSTLQR WIKREDENLF TDRSHRPHRL 
GRQKYRPEDE ALVLKVRDEF KYGKLRICSH LFRLHDLKIS TSTVARILEK HSVAPIRRFT
KHSPPIRYAK LVPGERVQLD VCKIRAGLYQ YTAIDDCTRL RVLKLYTRRS AANSIDFLDK
LIDEFHYPIQ RIQTDRGQEF FAVAFQQKLM DYCIKFRPIK PRSPHLNGKV ERSQQTDLQE
FYTTVDLRDP QLDDKLAQWQ FHYNYFRPHS SLGGKTPIEF ASEHSAKAPF WDEIEAIYDE
TKERIREQAY WRDLRMAKLT KKSKT