Gene Dfer_1942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1942 
Symbol 
ID8225513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2373942 
End bp2375447 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content41% 
IMG OID644929780 
Producthypothetical protein 
Protein accessionYP_003086332 
Protein GI255035711 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.507224 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATCA AAAATTTTAC AGACAAAGTA GCCATTGGTA TATTATTAAT TACGAGTAGT 
TTTTCATACG CCCAAACACC GGCTTTAACT AGTACCATTT CCGGAGTAGT TTGGAAAGAT
GGTAAACCAG CCGACGGATT AAGAGCAGAA TCAGAACCAA GGGTGGCCGG GATTTTGGTA
AAGCTTTTGA CAGCTGACAC ACAGGAGGTC GTATCAACTG CTTTGAGCAA TCAGAACGGA
GAATTTAGTG TTAAAGCCAA TGCTGGAAAC TACGTCATCG AATATGTATA TCCAGCCGAT
GGCTTCACTT TAACATCTCA ACGGGCAGGC ACCGATAATG CTATCAATAG TGCCGCCGAC
GCAGATAATT TTACTGCACC ATTTACGATT GTTGACAATC AGACAATTTC AGATTATGGG
CTGGGGCTTG TAGCCAAAGA AAATACGATT ACTTATTGTA CTCAAAAAGA ATCGGTTACT
ACTGAATGGA GTCAAAATTT GATTCTTCCA AAGTCCACAG TGACCCCGAT TCCGCTAAAC
GTAAAAATAT TCGCAGCAGA AGCAGTATAT CATCCAGTCA TTGGGGTAGA AAATACCGCT
ACAGCCAGCG GATACAGTAT TACAGCGGCT GGAAAAGTCA CCATGACAAT GCCTATAAAC
CCTGCTTCAT TGGCTATGAA CAGTGATGTG ACCATCGATG GCAGTCTTGC GGACTTTGAT
GGTGTCCAAG ATTACGGTGG GACATCGGGG GCCTCGGTTT TTAACAAGTA TTCGTTTGCC
AATGCTTACC CTGCGCGAAA TACCAGCAAT GCAACAATAA TCACAACGAA TTTTGTCGGC
TCCGGTAATG ATGTATTTAC CATCCCCACA CTTGCTCAGA GCTCTGTTGC CATAACAGGA
AGCGGTAACC TGAGAACTTC CATAGAAACT TATGTAAGCG CAGGCGCCTG TGTTGTTTAC
ACCTATGCAG AAGGCGCACT TCCAGTTACA TTAGTATCAT TCAATGCGAA AAAGCGAGAA
AATGTGAGCG AGTTGGAATG GAAAACCACT GCCGAGATCA ATAGTGATCG TTTTGAAATT
GAAAGAAGTA TTCAAGGGGG GGATTGGGAA AAAATAGGCA CTGTAGCAGC GGCAAAGCAA
AGTTCAGTGC TATCTAGTTA TTCATTCACT GATTCCGAAC CTTTAAACGG TCAGAACCTG
TACCGCCTAA AAATGATCGA TAGCGATGAA ACATTTGCAT ATAGTCGCAT TGTAAATCTC
ACTTTTAAAA ACAAATCCGA GCTGATCGTC TATCCGAATC CAGCTTCTGA AAGAATAACT
GTAAAATCGG AAGAACAAAA TGACGTATCC AAAATCGAAA TCTACAACCG ATTAGGAGTA
TTGGAAACGC AATCAGAAGA TGGCAATTCT ATTAATGTAC AAAAACTAAT CAATGGTATC
TACTCGATTA AGGTTTACTA CAAGACAGGC TTCAATGAAT CACAAAATAT AGTGATTGCG
AAATAG
 
Protein sequence
MRIKNFTDKV AIGILLITSS FSYAQTPALT STISGVVWKD GKPADGLRAE SEPRVAGILV 
KLLTADTQEV VSTALSNQNG EFSVKANAGN YVIEYVYPAD GFTLTSQRAG TDNAINSAAD
ADNFTAPFTI VDNQTISDYG LGLVAKENTI TYCTQKESVT TEWSQNLILP KSTVTPIPLN
VKIFAAEAVY HPVIGVENTA TASGYSITAA GKVTMTMPIN PASLAMNSDV TIDGSLADFD
GVQDYGGTSG ASVFNKYSFA NAYPARNTSN ATIITTNFVG SGNDVFTIPT LAQSSVAITG
SGNLRTSIET YVSAGACVVY TYAEGALPVT LVSFNAKKRE NVSELEWKTT AEINSDRFEI
ERSIQGGDWE KIGTVAAAKQ SSVLSSYSFT DSEPLNGQNL YRLKMIDSDE TFAYSRIVNL
TFKNKSELIV YPNPASERIT VKSEEQNDVS KIEIYNRLGV LETQSEDGNS INVQKLINGI
YSIKVYYKTG FNESQNIVIA K