| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1881 |
|---|
| Symbol | |
|---|
| ID | 8225452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 2318605 |
|---|
| End bp | 2319375 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644929729 |
|---|
| Product | Integrase catalytic region |
|---|
| Protein accession | YP_003086281 |
|---|
| Protein GI | 255035660 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2801] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.803149 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAACGAG AATCACAAGT GAAGACCTTG GTTGAACGAG AGCGAAAGCT TTTGCCACGT
TTGGGTACCA GAAAGCTTTA TCATCAGCTC AGGGAGTCCC TAAGCGCATC CCAAATCAGG
TTCGGGCGTG ATCAACTGTT TGATTTAATG CGAAAACATA GGATGCTGAT CGTTCCTAAG
CGGAGATATG TGCAAACAAC GATGTCAAAA CACTGGCTTA GAAAGTATCC AAACCTGGCC
AAAGATTTGA AGGTAACCAG GCCCGACCAG CTATGGGTAA GTGACATCAC CTACCTGAAA
ACCGATGAAG GGAATTGCTA CCTAAACCTG GTAACAGACG CATATAGCAG GAAAATAATG
GGCTATGCAA TTGCTGATAA TATGGAAGCG GTTGAAATGA AAAAGGCTTT CCAAATGGCT
GTTAAGTGCA GTATGAATGG ACTTGAAGGT CTTATCCATC ATTCTGACAG AGGATTACAG
TATTGTAGTG CCGAATACAC CAGTATTGCG AGGTTTAACC ATATCAATAT CAGCATGACC
GAAAACTCTG ACCCATACGA GAATGCATTA GCAGAAAGGA TGAACAAAAC GATGAAGGAA
GAATTTGGAC TAGGAAATAT TTTACCTTCC AGGAAACTGG CAGGTCATCT GGTCGATGAA
GCCGTTCAGC TTTACAACAA TTACAGACCA CATCTGTCCT TACAAATGCA AACACCTGAA
TACATTTACA AACAAAAATC CCAGTCACAG AAGCAACTGG GATCATTATA A
|
|---|
| Protein sequence | MQRESQVKTL VERERKLLPR LGTRKLYHQL RESLSASQIR FGRDQLFDLM RKHRMLIVPK
RRYVQTTMSK HWLRKYPNLA KDLKVTRPDQ LWVSDITYLK TDEGNCYLNL VTDAYSRKIM
GYAIADNMEA VEMKKAFQMA VKCSMNGLEG LIHHSDRGLQ YCSAEYTSIA RFNHINISMT
ENSDPYENAL AERMNKTMKE EFGLGNILPS RKLAGHLVDE AVQLYNNYRP HLSLQMQTPE
YIYKQKSQSQ KQLGSL
|
|---|
| |