| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1847 |
|---|
| Symbol | |
|---|
| ID | 8225418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 2274956 |
|---|
| End bp | 2275552 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644929697 |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_003086249 |
|---|
| Protein GI | 255035628 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGAAAAGC CTTTTGACAA CGCCTCCGAC TTAATACTTT GGCAGCGCCT CAGAGAGGAT
GATGAAGGTG CATTTACCGA ACTTACCCGC CGCTACTACC GCAAACTTTT ACATTACGGG
CAAAAATTCA CATCCAATAC ACAACTCGCC GAAGATGCAT TACAGGATTT GCTCGTCAAC
CTGTGGCTGC ACAGGAAGTC AGTGAAAGAA ACGCCGTCGG TAAACCACTA CCTGATGAAG
GCTTTCCGGA ACCAGATCTT TAAGGCCATC AAAGTTGCCA ACCGGACGAT CGAGTGGCAG
GACCAGCTCG ACGAGCTCCG CGCGGATATT CTCTCGGAAG AAAACCATTT CCACGGCGAC
CAGAGCCTTG ATTTCGGTAG AATGACCAGC CTTCTCACCA AGTTGCCAGA ACGCCAGAAA
GAGGTTCTTT ATCTTCGCTT TTTTCACGAC CTTAGCCCGG AGGAGATCGC CAGCATGCTT
GAAATCAAGC CTCAGTCGGT GCGAAATATC ATTCAGCGGG CATTGACCAA TCTCCGAGAA
CACTGGATTG CAATCATCCT AATTTTAACT ATTTATTATA ATTATTGCAA TAAATAA
|
|---|
| Protein sequence | MEKPFDNASD LILWQRLRED DEGAFTELTR RYYRKLLHYG QKFTSNTQLA EDALQDLLVN
LWLHRKSVKE TPSVNHYLMK AFRNQIFKAI KVANRTIEWQ DQLDELRADI LSEENHFHGD
QSLDFGRMTS LLTKLPERQK EVLYLRFFHD LSPEEIASML EIKPQSVRNI IQRALTNLRE
HWIAIILILT IYYNYCNK
|
|---|
| |