Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1768 |
Symbol | |
ID | 8225339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 2172898 |
End bp | 2173494 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644929622 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003086174 |
Protein GI | 255035553 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.433786 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTCAC AAGTCGAGAC AGATGAAAAT GCATTGAGCC GGCAATTGAA AAACGGCGAC CATGCTGCGT TTCAGGCAAT ATACGACCGG TTCAAACGGC CCCTGCTTGC ACACATTCTA TATGTTGTCA AATCACCTGA CCTTGCTGAG GAGGTCTTGC AGGATCTTTT CGTGAAGGTT TGGCAAAACC GCGCCAGTAT CGATCCGGAC AAATCTTTCA AAGGCTATTT GATTACCATC AGCAGCAACC TCATTTACGA TATGTTCCGC AAAGTGGCGC GCGACCGGCG ATTGCGCGAG CATTTCATGG CATCATTCGA GGATACGTAC GTGATCGATG ATCCGGGGAA CGTGGAAAGC GAGTTTTCTG AGCTTCATCA GGCGCTTGCC CTGCTGCCTC CACAGCGCCG CCGCGTGGTG GTGATGTGCA AGCTGGAAGA AAAGTCGTAC CGGGAAGTGA GCGAAATCCT GAACATCTCC ACCGCCACCG TCAATGACCA TATCCGGCAG GCCAATATTT TCCTTAAAAA ACACTTCCGC ATATTTCAGC ATGTGGTCGT GATAATTACT TCACTTCAAG CAATATTTTC CAGGTAG
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Protein sequence | MDSQVETDEN ALSRQLKNGD HAAFQAIYDR FKRPLLAHIL YVVKSPDLAE EVLQDLFVKV WQNRASIDPD KSFKGYLITI SSNLIYDMFR KVARDRRLRE HFMASFEDTY VIDDPGNVES EFSELHQALA LLPPQRRRVV VMCKLEEKSY REVSEILNIS TATVNDHIRQ ANIFLKKHFR IFQHVVVIIT SLQAIFSR
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