| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1730 |
|---|
| Symbol | |
|---|
| ID | 8225301 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 2113822 |
|---|
| End bp | 2114976 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644929584 |
|---|
| Product | PepSY-associated TM helix domain protein |
|---|
| Protein accession | YP_003086136 |
|---|
| Protein GI | 255035515 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTCA AAAAAGTCGC CCGCATAATT CACCTCTGGC TCGGACTCGC GTCCGGGCTG
GTGGTGTTTA TCGTGAGCAT TACCGGTTGC ATTTTTGCAT TTGAAGAAGA GCTTTTCCAC
CTATTTCACC GGCGGCTCGT GTACGTGGGC GCGCCGGCTA GCGCTCCCGT CCTTCCGGCT
TCCCTGCTGA AAGCCCGTGC GCAACAGGCA TTGGGTAACG CGGATACGAT CAATGCCGTG
AATGTTTACG GGGACCCGCG CATGGCCTAT GAATTCAATG TCTTCCAGGG ATCACATCAG
GCGGATAATG GCCTGTTCGA ACATCCCGGC CTGAACTGGA AGCGGGTTTA CGTGAACCAG
TACACGGGTG AGATAAATGG CGTTTTCGAC ATGGAATGGG AATTTTTTAT CACCGTGAGG
GCCATTCATC AGAACCTGTT GCTCGATCCG CAGATCGGTA GCCCGATTGT CGGCTCGGCG
ACGATCATTT TCATGGTGCT GCTCCTTTCG GGCCTGGTGC TTTGGTGGCC GCAAAACAGA
GCCGCGGCGC GGCAGCGGTT CCGGTTCAAA TGGAAAGAAA CCACCCGCTG GAAAAGACGG
AATTACGATT TACACAACAT TCCCGGGTTT TATGTCCTGA TAGTAGGCCT GTTCCTCGGG
CTTACCGGAA TCGTATGGTC GTTTCAGTGG TGGGAAAATA CTGTGTACCG CATGCTCGAC
GGCCAGGTGG TACAATTTAA ACTTGCCCGA AACCCCAACC CCGGCGGAGC ACACCACGCT
ACATTGCTCG ACCGCCAACT GGAAACGCTG CGGTCGGTTT ATCCTGACTT TAAGCGGATT
TATCTTTCAG AAATCTCATC CACCAACACC CTGCTCGCGG CGGTGAACCG TCCCGGCAAA
GACCTTTGGA CGCACTACGA TTACCACCAG TATGACCTCA CAACCGGCCG CGAATACGAC
CGTTTACTGC ACAATTCCAA AACCCGCGGC CAGAAATGGC GTAACAGCAA TTACGATCTT
CACACCGGCA AAACCCTGGG CCTGCCCGGT ATGATCCTCG CCTTCGCCGC CAGCCTCGTA
TGCGCGAGCC TGCCTGTTAC CGGGACTATC ATTTGGTGGG GAAGAAAGAA GAATCACCAG
AAAAAACGCA CTTAA
|
|---|
| Protein sequence | MTFKKVARII HLWLGLASGL VVFIVSITGC IFAFEEELFH LFHRRLVYVG APASAPVLPA
SLLKARAQQA LGNADTINAV NVYGDPRMAY EFNVFQGSHQ ADNGLFEHPG LNWKRVYVNQ
YTGEINGVFD MEWEFFITVR AIHQNLLLDP QIGSPIVGSA TIIFMVLLLS GLVLWWPQNR
AAARQRFRFK WKETTRWKRR NYDLHNIPGF YVLIVGLFLG LTGIVWSFQW WENTVYRMLD
GQVVQFKLAR NPNPGGAHHA TLLDRQLETL RSVYPDFKRI YLSEISSTNT LLAAVNRPGK
DLWTHYDYHQ YDLTTGREYD RLLHNSKTRG QKWRNSNYDL HTGKTLGLPG MILAFAASLV
CASLPVTGTI IWWGRKKNHQ KKRT
|
|---|
| |