| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1723 |
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| Symbol | |
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| ID | 8225294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 2099699 |
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| End bp | 2102914 |
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| Gene Length | 3216 bp |
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| Protein Length | 1071 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644929577 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003086129 |
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| Protein GI | 255035508 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000845953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.63993 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGAACA GAATGTTTAC TTCAAGCTTT TATCGCGTCC GCGGTACTTA TGGGGTGCCG
CTGCGGGTGC TCTTCGCAGT GTTGTTTTTG TTTTTTTGTT GTGACCTCGC GCAAGCGCAG
ACCGGCGGCC GGGGCAGTTT AGTCACTGTG AGTGGGCAGG TTACCGAGAA GGCATCCGGG
CAGCCGCTCG TGGGCGTGTC CATCCGTGTG AAGAATACGA CCGATGGCGT GGTCTCGGAT
GCGGATGGGA ATTACAAAAT CCAGGTGCCT GCGAATAGCA CTTTGCTGTT TACGTATATA
GGTTATAGTG ATGTGGAAGA GGCGGTCGGT AACCGCTCTA ACATTTCGCC CCAGCTGGAA
AGCAGCGACA AAGCCCTGAA CGAGGTGGTG GTCGTGGGTT ACGGAAGCCA GTCGAGGCGT
GAAATTACCG GCTCGGTGGC TTCGGTGAAT GCCCGGCAGA TCCAGGACCG GCCCGTGGTT
TCGTTCGGCG AGGCGCTGGC CGGGCAGGTG GCCGGCGTGC AGGTGCAGCA AACGTCCGCT
GCTCCCGGTG GTGGCTTATC CATCAAAATC CGGGGAACAG GCTCCATCAC GGCGGGTATC
CAGCCATTGT ATGTGATCGA TGGTGTGCCG CTGGACAACT CGGTGAGCAA TTCGGCGGCA
CAGGGCGGCG GCATTGGCAG CCAGTCTCCC GTTAACCCGC TGGCGAGCAT TAACCCCGGT
GATATTCAGT CGATTGACAT TTTGAAAGAT GCGGCCGCGA CGTCCATTTA CGGTTCACGC
GGGTCGAATG GTGTGGTGTT AATTACGACC AAACAAGGTG CAGCGGGCAA ATCGCAGATC
ACCGTTAATG CGAGCTACGG TTTCCAGGAG ATCGCCAAAA GAGTGGGCTT GATGACCAAT
GAAGAATACG CACGCCGCCA GATCGATATG CGGAATAACG ACTGGATTCG TGCCGGGGGA
AAAGCGACGG ACCCTAACTC GGTACGAAGC GGACCAGGCT TTAAAATCCC CGACGAGTTC
AAAAATCCAT CGGCCTATCC CTACACCGAC TGGCAGGATG AACTTTACCG CACCGCGCCG
ATGCAAAACT ATCAGATCGC AGCCTCCGGC GGGACCGAGA GCGCGCGGTA TTACGTGTCG
GGTAACTTTC AGAACCAGGA GGGTATCATC GTCAATTCGG GTTTCAAGAA GTATGCATTC
CGTTTGAATG TGGATGCCAA AGTTTCGGAC AGGATCAGGG TTGGCGCGCG TGTCGCCCCT
TCTTACACCA ACAACCGCAT TGCCACATCC GGCGGTATCC AGGATTATGG CGCGGTGGCG
GTGACGGTCA TGTCGACCCC GGGTTTCTAT CCGGCCAGAA ATGCGGACGG CTCCTATTCA
AGGTCGTTCA CACTGCATTT CGACGATGGT ACGCAGCAGA ACATCATTTA TAACAATGCA
CTCGCATTTG GTGAGGGTAT TCAGAACACA ATGAACCAGT TCAGCACCGT GGGCAGCTTG
TTTGCCACTG TTGACATTTT GAAAAATCTC CAATTTAAAA CCAGCGTCAA TGCGGATGTC
AACACATTCA GCAACAACCG CTTTTCGCCT TCCTACATCA GCGTAAGCCC TTCCAACGGC
CGCTCTTTTT CATCTGCCAA CATCAGCTGG ATCAATGAAA ACACGCTGAC GTACGACAAT
TCATTCGCGG AAAAGCACAA TGTGAATGTG CTGGTGGGTT TGACGGGGCA AAAGTCTTCG
TTTAACTCTA CCACGGTGAG CGCCAACTCT TTCCCGAACG ACCTCGTCCC TACGCTCAAT
GCGGGTATCG TGACAGGCGG AAGTTCAAGC CGCTCGCAAT GGACCCTGCT CTCGTTCCTG
AGCCGCGCGA CTTATAATTA CGACGAAAAA TACTTTTTGA CGGCTACTTT CCGCCGCGAC
GGTTCATCCC GCTTCGGGGC CGACAATAAG TGGGGTAACT TCCCTTCCGT TTCGGCCGGA
TGGCGAATCG GACAGGAAAA ATTCATGGCT AATGTGCCTA CTATCAGCGA ATTGAAAGTC
CGGGCGAGCT ACGGTCTGAT CGGAAACAAC CAGATCCCCG ACTATGCTTC CGTGGGCTTG
ATCAGCAGCG CTAACTACAT TTTCGGAACG GGCGACGGCG CGATCATCAA CGGTCTGGCG
CAGGGAACGC TCGGTAACAC CATTCTGGGT TGGGAAAAAG CCAAAGAACT GGATTTCGGT
ATTGATATTG GACTCTTCCA AAACCGCCTT TTCCTGAATC TGGATTATTA TAACAAACTG
ACTTCCGACC TGCTCCTGAA TGTGCCCGTG CCGCTTTCGA CCGGTTTTGA AACTGCGCTG
CGCAACCTGG GAAGTCTGCG TAACAAAGGA GTTGAAATTG CATTGGAAAC GAGAAATTTC
GCACGCAAAA ATTTCACCTG GACTACCAAT GCGAACATTT CATTTAACAC CAATACCGTA
GAATCACTGG GAGCCAGCGG CGCGCCGATT ATCGTGGCCA ACCGCGCGCA GGAAAACTCG
CTGACGCACA TCACGCAGAT CGGAAAGCCG CTGGGAAGTT ACTATGGCCT CGTTTTCGAC
GGCATTTATA ACACCCAGGC GGAAATCGAC GGTTCCGCGC ATTTGCCGAA CACATTCCCG
GGCGACGTCC GGTTCCGCGA CCTGAACAAC GACGGCCTGA TCAACGATTC CGACAGGACC
ATCATCGGAA ATAACCTGCC CGCATTCACC TACGGCATCA CGAATACGCT CAATGTCGGC
AACTTCGACT TCGGTGTCTC GTTGCAAGGT GTACAGGACG TAGATGTGAT GAACCTGACC
AAGCGGAGCG TTTACCGCAA TAACGCGTCG CTCTCCAACA ACTACTGGCG CTCGCCGGAG
GAACCTGGCG ATGGCAAAAC GTGGGGTGCC AACAATGCCG CCAACAACCG GAACATTTCA
TCGTACTTCG TGGAAGATGC CTCTTTCCTG CGCATCCGGA ACGTGACAAT CGGCTATCGG
TTCGACAAAA TTTTTGGCGG AAAAGTGATC AAGAATGCGC GGGCTTACGT GAACATCCAG
AACCTGCACA CTTTCACCAA ATACAGCGGC TATAACCCGG AAGTGAACAC GACCGAGGGT
GACCCGTGGA TTTCTTCCGC GCTCACGCCG GGCATCGACT ATGGTACTTA TCCCGTGGCG
AGAGCATTCG TATTCGGCCT CAACCTTGGT TTCTGA
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| Protein sequence | MGNRMFTSSF YRVRGTYGVP LRVLFAVLFL FFCCDLAQAQ TGGRGSLVTV SGQVTEKASG
QPLVGVSIRV KNTTDGVVSD ADGNYKIQVP ANSTLLFTYI GYSDVEEAVG NRSNISPQLE
SSDKALNEVV VVGYGSQSRR EITGSVASVN ARQIQDRPVV SFGEALAGQV AGVQVQQTSA
APGGGLSIKI RGTGSITAGI QPLYVIDGVP LDNSVSNSAA QGGGIGSQSP VNPLASINPG
DIQSIDILKD AAATSIYGSR GSNGVVLITT KQGAAGKSQI TVNASYGFQE IAKRVGLMTN
EEYARRQIDM RNNDWIRAGG KATDPNSVRS GPGFKIPDEF KNPSAYPYTD WQDELYRTAP
MQNYQIAASG GTESARYYVS GNFQNQEGII VNSGFKKYAF RLNVDAKVSD RIRVGARVAP
SYTNNRIATS GGIQDYGAVA VTVMSTPGFY PARNADGSYS RSFTLHFDDG TQQNIIYNNA
LAFGEGIQNT MNQFSTVGSL FATVDILKNL QFKTSVNADV NTFSNNRFSP SYISVSPSNG
RSFSSANISW INENTLTYDN SFAEKHNVNV LVGLTGQKSS FNSTTVSANS FPNDLVPTLN
AGIVTGGSSS RSQWTLLSFL SRATYNYDEK YFLTATFRRD GSSRFGADNK WGNFPSVSAG
WRIGQEKFMA NVPTISELKV RASYGLIGNN QIPDYASVGL ISSANYIFGT GDGAIINGLA
QGTLGNTILG WEKAKELDFG IDIGLFQNRL FLNLDYYNKL TSDLLLNVPV PLSTGFETAL
RNLGSLRNKG VEIALETRNF ARKNFTWTTN ANISFNTNTV ESLGASGAPI IVANRAQENS
LTHITQIGKP LGSYYGLVFD GIYNTQAEID GSAHLPNTFP GDVRFRDLNN DGLINDSDRT
IIGNNLPAFT YGITNTLNVG NFDFGVSLQG VQDVDVMNLT KRSVYRNNAS LSNNYWRSPE
EPGDGKTWGA NNAANNRNIS SYFVEDASFL RIRNVTIGYR FDKIFGGKVI KNARAYVNIQ
NLHTFTKYSG YNPEVNTTEG DPWISSALTP GIDYGTYPVA RAFVFGLNLG F
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