| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1703 |
|---|
| Symbol | |
|---|
| ID | 8225274 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 2076363 |
|---|
| End bp | 2077460 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644929557 |
|---|
| Product | anti-FecI sigma factor, FecR |
|---|
| Protein accession | YP_003086109 |
|---|
| Protein GI | 255035488 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGATT ACAGTGCCTA CACCATTGAA GAGCTGGCCC GGGACGATTA TTTCCGGCAT
GCGATCCTGA ACCCCGACCG CGAGTCGGCT GCATTCTGGC AATCGTGGGC AGCCGCCAGC
CCCGACCAGC GCGACCGGTA CGAAAAGGCG CGGATGATCG TGATCGCATT GGAACAGCGC
TATCACACGC AGCTTTCCCA GGAGGAAGTG GCGCATCGGG TAGGGCAGCT CGTGGGAAGG
CTCGATGAGC TGGAAGATGC ACCCCGGCCT GCCAAACCCG CATTCCTCCA CTACTGGTGG
CGCGCGGCGG CGGTGCTCGT GGCCGCATTG GGGTTTGCAT TGTGGAGCTA CCGCCATGAC
TGGAAACCGC TTCGCAGCGG CGAACCCGGC GCACAGGCAG CCAGCCGCAC GCTTTCCCGA
AACAATAATA CGCCGCACAT CCAGACGCTC ATGCTGAGCG ACAGCAGCAT TGTAACCCTT
TTCCCGGGAA GCGCCTTGCA GTTTCCCGAA ACATTCTCCG GCGACAGCCG CAAGGTAACC
CTCACCGGCG ATGCATTCTT CGAAGTGGCG CACGACGGCA AACCGTTCCT GGTGTACGCC
GGAGAAACGG TGACCAGGGT ATGGGGAACG CGCTTCCGCG TAACTGCCCT CCCGGGCGAC
AAGCAGGTGA AAGTGAGTGT AAAAAGCGGA AAGGTATCCG TTCACAGGGT TGAAGAATTT
AATCTTCCCA AAACTACTGA CACACAGCCC ATTCCCGGTG TAATGCTCAC CATGCACGAG
CAGGTCGTTT TCGATCGCAC CAATCACTTA TTGGAAAAAG CACATCTCAC CGACCTCGGC
GTGGTGGCCC AGGGCACCGA CTTGCGCGAG CAGGTATTTG TGGATGCGCC TGTGACAGAG
GTATTTAAAG AGCTGGAAAG CATTTACGGC ATCAAAATCC GGTTCGACGA GCGCTTGCTG
GGCGAATGCC GCATTATCAC TTCGTTCCGT GGGGAAACGC TCGTGGAACG GATCAACAGC
ATTTGTCAGG CGATCGGCGC GCATTACGAG CCGACGATGG GCGGCATCGT GATCTCCGGT
GACGGATGCG GCATTTAA
|
|---|
| Protein sequence | MYDYSAYTIE ELARDDYFRH AILNPDRESA AFWQSWAAAS PDQRDRYEKA RMIVIALEQR
YHTQLSQEEV AHRVGQLVGR LDELEDAPRP AKPAFLHYWW RAAAVLVAAL GFALWSYRHD
WKPLRSGEPG AQAASRTLSR NNNTPHIQTL MLSDSSIVTL FPGSALQFPE TFSGDSRKVT
LTGDAFFEVA HDGKPFLVYA GETVTRVWGT RFRVTALPGD KQVKVSVKSG KVSVHRVEEF
NLPKTTDTQP IPGVMLTMHE QVVFDRTNHL LEKAHLTDLG VVAQGTDLRE QVFVDAPVTE
VFKELESIYG IKIRFDERLL GECRIITSFR GETLVERINS ICQAIGAHYE PTMGGIVISG
DGCGI
|
|---|
| |