Gene Dfer_1667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1667 
Symbol 
ID8225238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2028350 
End bp2029879 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content56% 
IMG OID644929522 
ProductAnkyrin 
Protein accessionYP_003086074 
Protein GI255035453 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.359043 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TCCTTCTAAC CGCATTCATG CTGTCGGCGA TGTTCGCCAA TGCACAGCAA 
GGGCCCCGGG GCAACACGTT GATGAGCCCC GATTTCTGGA AAACCAAACC TACCGTGGAG
CAGGTGAAGG CGGAAATCGC GAAGGGCAAC AGCCCTTCCC AGCCGGATGC CGCTTCCTGG
GACCCCACAG CCCGTGCCAT CCTGAACGGC GCCCCATTGG AAACCATTAA GTTAATGGTG
GAGCAGGAGG GGAATAGCGT GAAGAAAAAA ACGCACCACA GCGCATCGTA CCTGCATTGG
GCGGCTGCGC GGGGGAATGC GGAACTGGTG GGCTACCTGA TCGACAAGGG CTCGGATGTG
CACTTGACGG ATAGCCACGG CGCAAGTGTG ATCGGCAATG CCGCAGCCAA TGGCAACCAG
GACAAGGGCG TTTACGAAGC GCTGTTCAAA GCGGGTGTGT CGCCCAAAGC AAAGTATGAC
AACGGCGCTA CCGTGCTCAT GCTGGGCGTG GCCGCCGACC CGGAACTTAC GCTGACCGAC
TATTTCATTT CCAAAGGGCT TTCCATCACC GATAAGGACG AATACGGACG TACCGTAGCC
GACTACGCTG CCCGCACGGG CAACCGCGAG CTGATGGAAA AGCTCATCAA AAGGGGCGTG
AAGCCGACGG GCCAGGCATT GTTCTTTGCC TCGCAGGGAT CACGCATGTC GAGCAACGGC
ATTGATACCT ACAAATACCT GGTAGAAACG CTGAAACTGG ACCCGAAAAC GATCAGCAAG
GACGGCGCAA CGGTGCTGCA CCAGCTCATC CGCAGACCTA ATGCGGAGGT GATCGCCTAC
TTCGTGGACA AAGGTGTTGA TTTGAACAAG GCTGATAATG AGGGCAATAC GCTGCTCATG
CTGGCCGCGT CGGGAAGGGA CGTACAGCTC GTGGAGCAAA CGTTGCTGCC GAAGGTCAAG
AACATCAATG CAAAAAATGA AAAAGGTGAA TCGGCATTGA CGAAGGCCAT TGCCACCGGA
TCGTCTGAAA TGGCGGCATT GCTGCTCAAA AACGGCGCGG ACGTGCAGGT GCTGGACAAA
GACCAATACA ACCTGGCCTA CTACTGGTTC GAATCGTACC GCGAAGGTGC GGGACCGGGC
GGTCCGGGCT CCGGTAGCGG CAATGGCCGT GAACGTGCCG AGCAGGAGTT TGAGAAAAAG
CTGGAATTGC TGAAAAGCGC CGGTCTGGAT GTGTCGGCTC CGCAGAAAAA CGGCAACACG
CTTTTCCACC TCGCCGTAGC GAAGGGCAAC GAGAAGCTGT TCCAGAGAGC TTCGGCACTG
GGCGCCAACA TCAATGCGCA GGATAAGGAA GGGGCAACGC CTCTGCACAA AGCGGCCCTT
ACTGCCAAAG ATGATAAAGT GCTGAAAGCG CTGATCGCGC TCGGCGCGAA AAAGGAGCTC
AAAACCGAGT TCGGTGAGAC GGCCTATGAC CTGGCAAAGG AAAATAACTT CCTCGCGGAC
AATAAGGTAA CCATCGATTT CCTTAAATAG
 
Protein sequence
MKKILLTAFM LSAMFANAQQ GPRGNTLMSP DFWKTKPTVE QVKAEIAKGN SPSQPDAASW 
DPTARAILNG APLETIKLMV EQEGNSVKKK THHSASYLHW AAARGNAELV GYLIDKGSDV
HLTDSHGASV IGNAAANGNQ DKGVYEALFK AGVSPKAKYD NGATVLMLGV AADPELTLTD
YFISKGLSIT DKDEYGRTVA DYAARTGNRE LMEKLIKRGV KPTGQALFFA SQGSRMSSNG
IDTYKYLVET LKLDPKTISK DGATVLHQLI RRPNAEVIAY FVDKGVDLNK ADNEGNTLLM
LAASGRDVQL VEQTLLPKVK NINAKNEKGE SALTKAIATG SSEMAALLLK NGADVQVLDK
DQYNLAYYWF ESYREGAGPG GPGSGSGNGR ERAEQEFEKK LELLKSAGLD VSAPQKNGNT
LFHLAVAKGN EKLFQRASAL GANINAQDKE GATPLHKAAL TAKDDKVLKA LIALGAKKEL
KTEFGETAYD LAKENNFLAD NKVTIDFLK