Gene Dfer_1660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1660 
Symbol 
ID8225231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2018919 
End bp2020394 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content54% 
IMG OID644929515 
Producthypothetical protein 
Protein accessionYP_003086067 
Protein GI255035446 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.293166 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATCT CTACATCCAC TTTAATTGCA TTTTTCAATC TGGCATTCTT CGGAAGTGCT 
GCAGTTGCCC AGGGACCGGT GTCGATCACC GGCACAGTAT GGCAGGAAAA GAAACCGTTT
GATGGAATCC GGGACCCTTC GGAGGCCGTA GTACCCGCCG TGCTGGTGAA ACTGCTCGCC
TCCGACGGCA AAGTTGTTGG CACGACCATC AGCAAAAGCG ACGGAACATT TGCACTGAGT
GCCGCTACCG CGGGAGCGTA CTTTCTGGAA TACGTGTATC CAACCAAAGG ATATTCCGTT
GTACCGAAGC GCGCAGGCAG CGACAACTCG GTAAACAGCG CAGCAAACAG TTCGAACTAT
TCCGATCAGA TTGTCGTCGA TGGCGTAACG CCCGTTGAAG CACAAGGGCT CGGCCTGCAA
CCGAAACCCA ACACGATCAC ATACTGTACC ATGAAAGAGC CCGCGGTAAC AGTATGGCAA
GAGGATCTGC TCCTCCCCAA ATCCAGCGTG GAGCCGCAAC CGGTTGCCGT CAACATCTTC
GCCTCCGGGG CGGTATGGCA CCCCACTATC GGGATCGAAA ACCTGGGAAC ACCCGACGAA
TATGACATTT CGGTACAGGG CATTATCACC CTGGCACTGC CCAAAAGCCA GACATTGAAA
GTCAATAGCG ATGTCCCTAA AACCGGAAAT TTGCCAGCTT ACGATGGTAC GCAGGACTAC
GGCGGCACAT CGGGAATCAG CTGGCCCAAC GAGTATTCAT TCGCGACGGG CAGTTACGAC
TATGCTCCGT TTTTAGTGGA CGGCGCTTTC AAAGGAAACG AATCACTGGT GATAGAGGGC
GACTCTAAAA GTGGCGTGAC CGTGGTGGGA AGCGGTAACC AGCAGACCTT CGTGCAAACG
TACGTAAGCG CGGGTGCGTG TGTGGTGTAC CAGTATGCAG AAGGTGCATT GCCCGTGACG
CTCGTTGCTT TCTCTGCCAA CCAGGAAGCA GGCCAGGTGC AGCTCAAATG GGAAACCGGC
GAAGAGACCA ATAGCAGCCA TTTCGAAGTA GAAGCCAGTG CCGATGGCAA GAAATTCGTG
CAGATAGGGC GAGTAGCCGC CTCCGGTGAA AGCTCAGAGC GCAAAACCTA TACATTCACT
GATGCAAAAC CGCTGGCCCC GGTGACGCTG TACCGTTTGA AAATGGTTGA TACCGACGAA
ACTTTCGCAT ACAGCCGGAT CGTCGTTACG AAAAACAACC AGGCTACCCT GTTCTCCGTA
TTCCCTAACC CTGCTGCCAA TGAGCTCGTT GTGCGCTCGG CACAGGAAGG AAATGTGGCG
GAAGTACAGC TGTTCGATGC GCGCTCGGTG CTCGTGCTGA AAAAGACCGG TGCAGAACCG
ATCGATATTT CGAAGCTCAC GCCCGGCACT TACGTGGTGC GTGTGGTAGA TCACAATGGA
GCGGCCCAGT CGCAGAAACT GCTGATCCAC CGCTAA
 
Protein sequence
MRISTSTLIA FFNLAFFGSA AVAQGPVSIT GTVWQEKKPF DGIRDPSEAV VPAVLVKLLA 
SDGKVVGTTI SKSDGTFALS AATAGAYFLE YVYPTKGYSV VPKRAGSDNS VNSAANSSNY
SDQIVVDGVT PVEAQGLGLQ PKPNTITYCT MKEPAVTVWQ EDLLLPKSSV EPQPVAVNIF
ASGAVWHPTI GIENLGTPDE YDISVQGIIT LALPKSQTLK VNSDVPKTGN LPAYDGTQDY
GGTSGISWPN EYSFATGSYD YAPFLVDGAF KGNESLVIEG DSKSGVTVVG SGNQQTFVQT
YVSAGACVVY QYAEGALPVT LVAFSANQEA GQVQLKWETG EETNSSHFEV EASADGKKFV
QIGRVAASGE SSERKTYTFT DAKPLAPVTL YRLKMVDTDE TFAYSRIVVT KNNQATLFSV
FPNPAANELV VRSAQEGNVA EVQLFDARSV LVLKKTGAEP IDISKLTPGT YVVRVVDHNG
AAQSQKLLIH R