Gene Dfer_1610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1610 
Symbol 
ID8225181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1948760 
End bp1949584 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content57% 
IMG OID644929466 
ProductMethyltransferase type 11 
Protein accessionYP_003086018 
Protein GI255035397 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA AAATGAATGC AAACAAAGCA CTTTGGGAAA AGGGTGACTT CACCCGTCTG 
GCAGAAACAA TGCGCAACAG CGGCACTGCA CTTGTAGCAA AATTGGGCGT AAAGAAAGAT
ATGGATGTGC TCGACCTGGG CTGCGGCGAC GGCACCACGG CCCTCCCCTC TGCCCGCCTG
GGCGCGAACG TGCAGGGTGT GGATATCGCC CGTAACCTCG TAGCCGCAGG CAATGCCCGC
GCGCAGGCCG AGGGACTGAC GAACATCACA TTCCGCGAAG GCGACGCAAT ACACCTGGAC
GACATCGCCG ACGAAAGCTT CGACCTCGTG GTGAGTATTT TCGGGGCCAT GTTCGCACCG
CAGCCTTTTG ATGTGGCAAA GGAAATGTTC CGCGTAACGC GGCGCGGCGG CAGGATCGTG
ATGGGCAACT GGATACCCGG CGACCCTACG CTCGTGGCGC AGATCCTGCG GGTGAGCTCC
GCCTATACAC CCGCACCGCC GGAGGGCTTT GTGAGTCCGA TGCTGTGGGG CGTGGAAAGC
AATGTAACGG AGCGTTTCGT TGCCGCAGGC GCTTCGAAAG AAAACATATC CTTTGAAAGG
GAAACTTTCA CCTTCGAGGC GCCTTACACG CCGGCGGTGT TTCTCGACAC ATTCAGAAAA
TATTACGGGC CTACGATGAA TGCATTCGAG GCAGCGGCGA AAAACGGGCA GGAAGCCGAT
CTTCAACGCG AGCTGGAAGC ATTGTTCGAA AGCCAGAACC AGAGCGCCGA TAAGGGTAAA
ACCTCCATTC CGGCCACGTT TCTGAAAGTG ACGGTCCGAC GCTAG
 
Protein sequence
MKNKMNANKA LWEKGDFTRL AETMRNSGTA LVAKLGVKKD MDVLDLGCGD GTTALPSARL 
GANVQGVDIA RNLVAAGNAR AQAEGLTNIT FREGDAIHLD DIADESFDLV VSIFGAMFAP
QPFDVAKEMF RVTRRGGRIV MGNWIPGDPT LVAQILRVSS AYTPAPPEGF VSPMLWGVES
NVTERFVAAG ASKENISFER ETFTFEAPYT PAVFLDTFRK YYGPTMNAFE AAAKNGQEAD
LQRELEALFE SQNQSADKGK TSIPATFLKV TVRR