| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1607 |
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| Symbol | |
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| ID | 8225178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1942366 |
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| End bp | 1946466 |
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| Gene Length | 4101 bp |
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| Protein Length | 1366 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644929463 |
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| Product | histidine kinase |
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| Protein accession | YP_003086015 |
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| Protein GI | 255035394 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.89561 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCTT CGTACCCGGC CATCCTGCTC TTTGTGCTGG CATTCAGCCT GAACCTGGCC
GCCCAGAAGC CCGCGTCACC ACTCGCGAAA ATCTGGCAGC AAAGCCTGCC ATTCATCACC
AATTATTCCA CGGACGATTA CAAGGCCGCT TTCCAGAACT GGGCATTGGT GCAAGGCAAC
AACGGCATCA TGTACGCGGC CAATAATTCG GGCGTACTTG AATACGACGG CACATCCTGG
CAGCTCACGC CTACCACCGA GGGCAATCCC GTACGATCGC TCGCGAAGGA CCCGCAGGGG
CGCATTTACG TGGGCGGTTC GGGAGAAGTG GGTTACCTCG CGGCCAACAG CCAAAATAAA
ACGGTGTTCC GTTCGCTGAA AGCCATGCTC AGCCCCGCCG ACCGGAATTT CGGGAATGTG
TGGTTCACAT TTGCAGGCAA AGGCTCGGTA TATTTCGTTT GCGACCAGCA CATTCTCGAA
TTCGCCGGGG GGAAATTCAA GGTTTGGAAA AGCGACATCG GCGCGCTCGG TTTTGCGTGG
TATATCCGGG ATACTTTATA TGTGAGCGTG AGCGGAAAGG GTTTGTTCCG AAAAGAAAAG
AATGCGCTGA AACTCGTTGA AGGCGGAGAG GCATTCAAAG GAATGGGACT CACAGGATTG
CTGCCCTACG AAAACGGCCA GCTGCTGGCA GTGGGCCTTA GCAAGGAATT CTACATTTAC
GACGGGACCA AACTGGCGCC GTTCATGAAA GACGGCGAGC GGGTGCGGAT TAGGGACGCC
GTGTACCACA GCGCGCAGCT CAGCAATGGC GACTATGCCC TGGCCACCAC AGGTTCGGGA
TTTTACATCA TGGACCGCCA AGGCACGATC CGCAACAATA TATGCCGGAA GGAAGGCCTG
TCGAGCGATG CGGTGTACTC GGTGTTTGAG GATGCGGAAA AGGACGTTTG GCTTGCCACC
GATAATGGTA TCAGTCGGCT GGAAATCAGT TCGTCGCTGC GGGTGCTGAA CGAAAACCAC
GGCCTGGACG AGAATCCGAT GGACATCGAG GTGTTTGGCG GCAAGCTGTT CACGACCAAC
AGCAAAGGGC TGTTCGAACT GACCAGCCAG CCCTCACAAG GGATTGCCAA ACCCTATTTC
AAAAAGATCG CGGGGATTGA CAACCTCACC ATGCATTGCC AGACCTACGG CAACGAAATG
CTCGTATCCA ACTACGACGG CGTTTTTGTA CTGAACCAAA ACGGGCAAAT GTCGCATATC
GCGAAGGAAA ACGTGGTACG CGTGGAGGAG TCGCGGTCGG CGGAGATGCC CGGGCATTTA
CTCGTAGGAC TGGAAGGTAA CGGCCTCACC GAGCTACTGT TCCGCGACGG CAAATGGATA
CAGGGCGACC GGCGCGACGA TATGAAATTT TATTCCGAAA GCTTCGCGCG GGCCGGCGAC
GGCACCATTT TCCTGAACAG CCGCCGCAAT GGCATTTATG AGATCGTGTG GCAAACGCCC
GGCCGCGAGC ACACGCTGGC GGAGCCGTTC AAACTCATTC ACCACGGGCC TGAAAACGGG
CTGTCGTCCA ACAAAATCCG CTGGCTGGAA AAGGTCGGCA ACACGGTGTA CGCCTCCACC
GACGAGGCCA TGCACCGCTA TAACCCAGCC AAACGGGCAT TCGAGGTAGA TCGGGCGCTC
ACGGCAGGCA TAGCGCCTTA CAAGGGCGGG TGGATTAATG AAATCATCGC GGGCCGGGAT
GGTACGATGT GGTTCACATT GTACCACAAC TACCAGAGCC AGGTTTTTGG GTATGCTAAT
AGCCGGTTGC AAAGGTTACC GGTTTCGGGA AGGCTGTCCG ATGCGCTCAT TTCCAAGGTA
CACGACAATG GCGACGGCTT TCTGCTCTTT GGCTCGAACA AATGGTTGGC TCTTTTTAAC
AGAAACCTAA AAACTACTGT TAATCAACAC TTTAAAACAC TTATCCGGCA GGTTACCATC
GATCAGGATT CGCTTGTAGG CTTCCGGGAC GGGGCGCCGG AAATTGCCTA CGGGCACCGG
CTGCGGTTTC GGTTTGCGTT GCCGGCTTAT GACCTTTCGT CCAAAAATCA ATTCCAGTAT
TTTCTCGAAG GCTTCCACGA TCAATGGTCG GCGTGGTCCG CCGAGCGGTT TGTCGATTTC
ACCAATCTAC CCGAGGGCCG CTACGTGTTC CGCGTGCGCG GTCGGAACGT ATATGGAGAA
GCGGGAGGTG AGGCCAGGCT GGCTTTCGCC ATTTTGGCGC CCTGGTACCG CACCTGGTGG
GCTTATGCCG TTTACGCGCT GCTATTGGGC GGGTTCGGGG TGTTGCTGGT GCGGTTCCGT
GAGCGGAAGC TGCAAATGGA GAAGCTTGTT TTGGAAAACA CCGTCCGCGA GCGCACGGAA
AAAATCATGC TCCAAACGGA AGAGCTGAAA GAAATGGACC GTATCAAATC ACGGTTTTTT
GCCAACATTT CCCACGAATT CCGCACGCCG CTCACGCTCA TCCTGGCACC GCTCGAAGAA
GAATTGAACA AGAAATCACC CGAAGCCCAG GATAAACTGC TCATGATGAA GCGCTATGCC
AACCGGCTGC TCGAGCTGGT GAACCAGCTG CTCAGCCTCT CGAAACTCGA AGCCGGTAAA
ATGGAGCTGC AAATCCAAAA AAGCGACCTG CGCCGGTTCC TGGGCGTACT GTCCTCTTCT
TTCGATTCCC TTGCGCAGCA TAAGGGCATC TCGTTTACAA CGACCGTCGG CGTGCCGGAA
GGCCACTTCT GGTTCGATCC AGACAAGCTG GAAAAGGTGA TTATCAACCT GCTTTCCAAT
GCATTCAAAT TCACACCGGC AGGCGGATCG GTCCGTTTCG AAGCGCAAGT AACTCCGCGT
GCAGGCAGGC AGATCCTGCA CATCGCCGTG GCCGACACCG GTCCTGGTAT TGCGCCGGCA
GAGCAGAAGC AGGTGTTTGA ATCATTTTAC CAGGCCAGGC GCACCTCCGA AAATCACGAC
GGAGGCACGG GGTTGGGGCT CGCATTCGCG AAAGAGCTTG TGAAGCTGCA TAAAGGAGAG
ATTTCGCTGC AAAGCGAGGT GGGCAAAGGT TCGGTTTTCT CCATCGAGGT GCCCGTGGAT
GCGGACGCCT ACGACGCCGC GCAGATCATG GAAGCCGGCC TTGAAGAAAA CGAGTGGACG
CAGCCCGCAA GCGTTATGAC TCACACATTT ATGGCAGAGA CCCCGATTCA TCCGCAGGCT
GAAACACCTG CTCATCCACA GCGCGAAACA CCGCTCAGCA CAAAATCCCA AACCGGCACC
GTAAAAGAGC CCGCGCCGCA CAGCCGCCCT TCGCGGGAGA CGGTGCTCAT TGCCGAGGAT
AATGCCGAAC TGCGCGATTA CATGGCTTCG CTGCTGGAAA ATCAATATAC CGTTCTCAAA
GCAGCGGACG GCCAGGAAGC GTTATCATGG GCCCGAAAAG TATTGCCCAA CCTGATCATC
AGCGACCTCA TGATGCCCCG GATGGACGGT ATGGAGCTCA CCGTCAGCAT TAAATCCGAC
GAACGCACGA GCCACATTCC CGTAATCCTG CTTACGGCCA AAAGCGGCCA GGAGTCGCGG
ATCGACGGCC TGAAAACCGG GGCGGACGAC TATCTTACCA AGCCATTTTC AGTAGAAGAA
CTCACCGTGC GCGTCGCCAA CCTGATCGAA CTCAGGAAAA AACTCGCGGA GCGCTACCGT
GAACGTATCC GGGTACACGT TACCTCTGCC GGGGAAATGT CCCTCGACGA CAAGTTTTTG
ATGAAAGCCA AAGAAATTGT GGAGGCTAAT ATGGAGGATG CCTTGTTTTC AGTCGAAAAA
ATGGCGGAAG AGATGAGCCT GAGCCGCACG CAGCTGCTGC GGAAACTGAA AGCGCTCACC
GGCCTCGCCC CCAACGATTT CATCCGCGAC CTGCGCCTTC AGAAAGCCGC CGAAATGATC
CGCCAGAAGG CCGATACGAT CACACAGATC GGCTATGCGG TCGGATTTAG TGACCAATCG
TATTTCAGCA AGAGCTTCAA GAAAGAATTT GGCGAAACCC CCACAGAATA CGCAGCAAGG
GTTTCCCAAA AAGAAATGTG A
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| Protein sequence | MKASYPAILL FVLAFSLNLA AQKPASPLAK IWQQSLPFIT NYSTDDYKAA FQNWALVQGN
NGIMYAANNS GVLEYDGTSW QLTPTTEGNP VRSLAKDPQG RIYVGGSGEV GYLAANSQNK
TVFRSLKAML SPADRNFGNV WFTFAGKGSV YFVCDQHILE FAGGKFKVWK SDIGALGFAW
YIRDTLYVSV SGKGLFRKEK NALKLVEGGE AFKGMGLTGL LPYENGQLLA VGLSKEFYIY
DGTKLAPFMK DGERVRIRDA VYHSAQLSNG DYALATTGSG FYIMDRQGTI RNNICRKEGL
SSDAVYSVFE DAEKDVWLAT DNGISRLEIS SSLRVLNENH GLDENPMDIE VFGGKLFTTN
SKGLFELTSQ PSQGIAKPYF KKIAGIDNLT MHCQTYGNEM LVSNYDGVFV LNQNGQMSHI
AKENVVRVEE SRSAEMPGHL LVGLEGNGLT ELLFRDGKWI QGDRRDDMKF YSESFARAGD
GTIFLNSRRN GIYEIVWQTP GREHTLAEPF KLIHHGPENG LSSNKIRWLE KVGNTVYAST
DEAMHRYNPA KRAFEVDRAL TAGIAPYKGG WINEIIAGRD GTMWFTLYHN YQSQVFGYAN
SRLQRLPVSG RLSDALISKV HDNGDGFLLF GSNKWLALFN RNLKTTVNQH FKTLIRQVTI
DQDSLVGFRD GAPEIAYGHR LRFRFALPAY DLSSKNQFQY FLEGFHDQWS AWSAERFVDF
TNLPEGRYVF RVRGRNVYGE AGGEARLAFA ILAPWYRTWW AYAVYALLLG GFGVLLVRFR
ERKLQMEKLV LENTVRERTE KIMLQTEELK EMDRIKSRFF ANISHEFRTP LTLILAPLEE
ELNKKSPEAQ DKLLMMKRYA NRLLELVNQL LSLSKLEAGK MELQIQKSDL RRFLGVLSSS
FDSLAQHKGI SFTTTVGVPE GHFWFDPDKL EKVIINLLSN AFKFTPAGGS VRFEAQVTPR
AGRQILHIAV ADTGPGIAPA EQKQVFESFY QARRTSENHD GGTGLGLAFA KELVKLHKGE
ISLQSEVGKG SVFSIEVPVD ADAYDAAQIM EAGLEENEWT QPASVMTHTF MAETPIHPQA
ETPAHPQRET PLSTKSQTGT VKEPAPHSRP SRETVLIAED NAELRDYMAS LLENQYTVLK
AADGQEALSW ARKVLPNLII SDLMMPRMDG MELTVSIKSD ERTSHIPVIL LTAKSGQESR
IDGLKTGADD YLTKPFSVEE LTVRVANLIE LRKKLAERYR ERIRVHVTSA GEMSLDDKFL
MKAKEIVEAN MEDALFSVEK MAEEMSLSRT QLLRKLKALT GLAPNDFIRD LRLQKAAEMI
RQKADTITQI GYAVGFSDQS YFSKSFKKEF GETPTEYAAR VSQKEM
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