| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1574 |
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| Symbol | |
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| ID | 8225145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1887731 |
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| End bp | 1891867 |
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| Gene Length | 4137 bp |
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| Protein Length | 1378 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644929431 |
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| Product | histidine kinase |
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| Protein accession | YP_003085983 |
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| Protein GI | 255035362 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.455228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGTT GGGTGATATG TTTCTTGGTG CTCCTGGTGG GCTTCATGGG ATGGGCGGAG
CAGGGGACGG CGCAGCCTGC CGACTATCAG TTTGTTCGCT ACAACACCGA AAAAGGCCTT
TCGCATAACC AGGTCAACTG CTTTTTGAAG GACAGCCGCG GCTTCGTCTG GATCGGGACT
GCCAATGGGC TGAACCGCTT CGATGGCTAT TCATTCCGCG TTTTCAGGCA TGATCCGGCC
GATTCGGCCA GCATTTCCGA CCGTCAGGTG AATGCGATTT TCGAAGATCC GCAAGGTTAC
ATCTGGATCA ATACCCGGAT CGGCTTTGAT GTGTACGACC CCGTTACCGA AACCATCGAT
CACAATGCCA ACCGCGCTGC TCACCGTTTC GGGCTCAGCG ACGCCGATTT TAACCGCGTG
ATCAAAACCC GCTCGGGCGA CTACTGGATC AGCCATAACA AACTCGGACT CCTGAAATTT
GTAACTGCCA CCAAAACGCT CGTCAGAGTG CGTTTCAGCC CTGCCGGGGA TGCCGCCGGC
GGAGGTACCC GCGTCATTTC GGACTTCGAC GAGGATGCGC AGGGCAATCT CTGGGTGGTT
TGCGACGACG GCCTGCTCGC CCGCGTGAAC GCCCGCACGC ACAAGATCGA TATCCAAAGC
GCTTTGTTAC AGCGCCGAAG CCTCGACAAG CTTTCCAACC GCAAGGTGTT TGTAGATGCC
GACGGCCAGC CGTGGGTGTA CATTGTGAAA GCAGCCCTGG GCGCATTCAA TTTCGATTTC
CAAAAGAATG TCCTGCGCGT AGCCAGTACA ACCGGGCCTG ATTTCAGGCT GAGCAACAAT
GCGGTAAGCG CGATGGTGCT CGGACCCGAC GGACGGATCT GGATCGGGAC CGACCACGGC
GGCATTAATA TTCTCGACAA AAAAAGTGGC TCCGTCACCA CGCTGCGCTC CAATCCCGGC
GACCCGCGGA CGATCAGCCA GAACAGCATC CAGGCATTGT ACCGCGACGC CACAGGCATG
ATCTGGGCCG GGACGTTCAA GCAGGGATTT TGTAATTATC ACCAGAATAT CTTCCGGTTT
TCACTCGTAC GCCACTTGCC CGGCGACGCG AGCAGTCTGC CCTTCGACGA CGTGAATGTG
TTTGCCGAAG ACAGGAAGGG GAATTTATGG GTAGGCACCA ATGGCGGCGG ACTGATCTAT
TACGATCGGC AGAACAACAG CTTCCGGCAG TTCAAGGCCC GGCCCGGCGA TCCGAACAGT
CTCAGTAATG ATGTGATTGT CAGCTTGTTC CTCGATAGCC AGGATGTGCT CTGGATAGGA
ACGTATTTCG GCGGGCTCAA CAGTTTCGAC GGCCGGAAGT TCACCCGCTA CCTCCACGAC
CCGGCCGATT CGACCAGCCT CGTCGACGAT CGTGTGTGGG AGATATTTGA AGATTCGCGC
GGACGACTGT GGGTAGGCAC CATGGCCGAT GGCCTCGACC TTTTCGACCG GTCGAAAAGG
ACATTCAGGC ACTACCGCAA TCTGGCGCCC AATTCGGTGA GTTCCGACTA CATTTCGGCA
TTGATGGAGG ACCGCGAGGG CAACCTGTGG GTCGGCACGG CGAACGGCGT GGACGTGCTC
ATGCGCGAAA CCGGACGCTT TGTGCATTAT GCGCACCGTG CAGGCGACCG CAGCAGCCTC
AGCAGCGACG CCGTCACGGC CCTCGTGCAG GATGGTTCGG GGAATATCTG GATCGGCACG
TCCGAGGGCC TCAACCGCTA CGACGCCGGC CGCAATGCAT TCGTTACGTA CGACACCCGC
CACGGTCTGC CCGATAATGC CATCCTTACC GTGGCCGTCG ACAAGCGGCA GGGATTATGG
CTCGGTACGC CCAAAGGCCT CGTGAATTTG CAGGTCTCCA AAAGCGCAGG AGGAATTCCG
ACCGCATTTC AGGTCCGTAC GTTCAACGAA GTCGATGGGT TACAGGGGCG CGGCTTTAAT
GAGAATGCGG CGCTGCGACT GCGAACGGGC GAGCTTGTGT TCGGGGGCGC GAACGGTTTT
TCGATATTCG ACCCCGCGCG GGTTACCGAC GAGGCCGCCG CTGCCAAAGT GGTGCTCACC
GATTTTCAGA TTTTTAACAA AAGCATCCGT CCGGGAATGC CCGCAGCAGG CGATCCCGTA
CTTGAAAAGT CGGTCTCGAT CACCGAGCGC ATTGAGCTGC AACACAGCCA GAATGTGTTC
ACGATCGAAT TTGCCGCATT GAATTTCCTT CATCCCGAAA AAAATCATTA CCTCTACACG
CTGCAAGGGT TTAACGACCA ATGGTTTGAG GCCGACAACA CCCGGCGGGT TACCTACACC
AACCTCGACC CCGGTTCCTA TGTGTTCAAG GTCAAAACAC GGGAGGGTGG GGCCGTTACC
GAACGAAGGC TCGAAATCCG TATTCTACCT CCTTTCTGGC GGACGCCCTG GGCGTATCTC
CTCTACTTCC TGCTTTTTGC GGGTGCATTG ATGGTCGCGC GCTGGATATT GATCGAACGT
GAGCGGATGA ATTTCAAGCT GGAACAGGAA CGGCGGTATG CGCAGCAAAT GCATGAGCTG
GATTTGATGA AAATCAGGTT TTTTACCAAT GTGAGCCACG AGTTCCGCAC GCCGCTGACG
CTGATGCTTA CGCCGCTCGA AAACCTGCTG ACGAACATCC GGGCGGATAA CACGGTCCAT
CGGCAGCTGT CGCTCGTGCA CCGAAATGCC CGGCGGCTGC TCAACCTGGT GACCCAAATG
CTCGATTTCA AGAAGCTGGA AGTGGAGGAG ACGCAGTTTA TGCCGGAGCG GGGCGATATC
GTGCGGTTCG TGCGGCAAAT CGCGCAGACG TTCTCCGACC TGTCCGAGCA CAAGCACATT
CGCTACCGGT TCGAAACGGC CATTGAATCG CGGTACGCGG ATTTCGACCA GGATAAGTTA
TCGAAAGTGA TGTACAACCT GCTGTCGAAT GCATTCAAAT TCACGCCGGA AAACGGCCAG
GTTACCGTGC GGCTGCGCGT GGTGGAGCAA GAGAGCGGTG AAGCCATCGA GATCAGCGTC
GAGGATTCGG GCATCGGCAT TCCCCCCGAG GCCCAGCCGA AAGTATTCGA ACGTTTCTAC
CAGCATCCCA CGCCCGCACA TATCATGAAC CAGGGCAGCG GGATCGGCCT GTCCATTGCG
GGGGAGTTTA CCAAAATGCA CGACGGCACC ATCGGCCTCG AAAGCCAGCC CGGAAAAGGC
AGCACATTCA CCGTGACATT ACCCCTCCGC GAAACGCTCG CACGCCGTGC AACCCTGCCC
GAAGCGGATG TGATCCCGGC AGTAACCGCC GACATCGACA TTGACATACC CACAGAAAAT
GCGGGCAAGG ACAAGCCGCT GGTGCTGCTG GTCGAGGACA ACGACGAGTT CAGGGAGTAT
CTCAAAGAAG TATTTCAGAA AGATTACCGG ATTATTGAAG CCGCTAATGG CAAAATAGGG
CTGGAAATGG CGCTCGAACA CGTGCCGGAC CTGATTGTGA GCGATGTAAT GATGCCCGAA
ATGGATGGGA CCGAGCTTTG CAGGACCATT AAAACCGACC GGCGGATTTC GCACATCCCC
GTGGTGCTGC TTACGGCGCG GGCCGAAGAA GAACAGCAAT TGCAGGGCTA CCAAACCGGG
GCCGACGCGT ATGTGACCAA GCCGTTCCGG CTGGATATTT TGCAGGTCAG GATCGCCAAC
CTGATCTCCC AGCGCGAGCA GCTGCAAAAA CAATTCCAGC AGCATATCGC CATCCGTCCG
AGCGAAGTGC CGGCGCGGTC CATGGACGAG CAATTTGTGA ACGGGGCCGT GCGCGTGGTG
GAGGCCAACC TCGCCAATCC CGAATACACG GTGGAGGAGC TCAGCGACGC GATGTCGATG
AGCCGCGTTT ATCTCTACAA AAAAATACTG TCCCTCACAG GCAAAACGCC CGTGGAATTC
ATTCGCATTA TCCGCATCCG GCGGGCCGCC GACCTGCTCG CGAAAAGCCA GCTGACGGTG
TCGGAAATTG CCTACCAGGT CGGGTTCAAC AACCCGAAAT ACTTCACCAG GCTCTTCAAG
GAGGAGTACC AGACGCTTCC GACCGAATAC CGGAAAAAGC ATGCCGTCCA GGCCTGA
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| Protein sequence | MNRWVICFLV LLVGFMGWAE QGTAQPADYQ FVRYNTEKGL SHNQVNCFLK DSRGFVWIGT
ANGLNRFDGY SFRVFRHDPA DSASISDRQV NAIFEDPQGY IWINTRIGFD VYDPVTETID
HNANRAAHRF GLSDADFNRV IKTRSGDYWI SHNKLGLLKF VTATKTLVRV RFSPAGDAAG
GGTRVISDFD EDAQGNLWVV CDDGLLARVN ARTHKIDIQS ALLQRRSLDK LSNRKVFVDA
DGQPWVYIVK AALGAFNFDF QKNVLRVAST TGPDFRLSNN AVSAMVLGPD GRIWIGTDHG
GINILDKKSG SVTTLRSNPG DPRTISQNSI QALYRDATGM IWAGTFKQGF CNYHQNIFRF
SLVRHLPGDA SSLPFDDVNV FAEDRKGNLW VGTNGGGLIY YDRQNNSFRQ FKARPGDPNS
LSNDVIVSLF LDSQDVLWIG TYFGGLNSFD GRKFTRYLHD PADSTSLVDD RVWEIFEDSR
GRLWVGTMAD GLDLFDRSKR TFRHYRNLAP NSVSSDYISA LMEDREGNLW VGTANGVDVL
MRETGRFVHY AHRAGDRSSL SSDAVTALVQ DGSGNIWIGT SEGLNRYDAG RNAFVTYDTR
HGLPDNAILT VAVDKRQGLW LGTPKGLVNL QVSKSAGGIP TAFQVRTFNE VDGLQGRGFN
ENAALRLRTG ELVFGGANGF SIFDPARVTD EAAAAKVVLT DFQIFNKSIR PGMPAAGDPV
LEKSVSITER IELQHSQNVF TIEFAALNFL HPEKNHYLYT LQGFNDQWFE ADNTRRVTYT
NLDPGSYVFK VKTREGGAVT ERRLEIRILP PFWRTPWAYL LYFLLFAGAL MVARWILIER
ERMNFKLEQE RRYAQQMHEL DLMKIRFFTN VSHEFRTPLT LMLTPLENLL TNIRADNTVH
RQLSLVHRNA RRLLNLVTQM LDFKKLEVEE TQFMPERGDI VRFVRQIAQT FSDLSEHKHI
RYRFETAIES RYADFDQDKL SKVMYNLLSN AFKFTPENGQ VTVRLRVVEQ ESGEAIEISV
EDSGIGIPPE AQPKVFERFY QHPTPAHIMN QGSGIGLSIA GEFTKMHDGT IGLESQPGKG
STFTVTLPLR ETLARRATLP EADVIPAVTA DIDIDIPTEN AGKDKPLVLL VEDNDEFREY
LKEVFQKDYR IIEAANGKIG LEMALEHVPD LIVSDVMMPE MDGTELCRTI KTDRRISHIP
VVLLTARAEE EQQLQGYQTG ADAYVTKPFR LDILQVRIAN LISQREQLQK QFQQHIAIRP
SEVPARSMDE QFVNGAVRVV EANLANPEYT VEELSDAMSM SRVYLYKKIL SLTGKTPVEF
IRIIRIRRAA DLLAKSQLTV SEIAYQVGFN NPKYFTRLFK EEYQTLPTEY RKKHAVQA
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