Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1571 |
Symbol | |
ID | 8225142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 1881264 |
End bp | 1882433 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644929428 |
Product | hypothetical protein |
Protein accession | YP_003085980 |
Protein GI | 255035359 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.023925 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.759951 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATTTCA AAAATATATG CAAAACAGGC CTGGGGCTGC TGTTGGCGGC GGGTATGCTG CTGACGTTCC AGAGCTGTAA CGACGACGAC ATCGACGGCG CGCCGTCGAT CAGCAACGTA CGCCTGCTCG ATCCGACGAA AGCCGACAGC TCGCTATCCG CCGCTGAGCC GGGCAGCCTG GTCGTGATCC AGGGGCAAAA CCTGGGCAGT GTGCTCAAAG TGTATTTCAA TGATTTCGAA TCGACGTTCA ACTCAGCATT GGGCAGCAAC TCGAATATCA TCATTACCAT TCCCGCCAAT GCGCCCACCA AAGCGGTGGA CGCGGGCGTG CCCAACAAGA TCCGCGTAGT GACCAAAGGC GGCGAAACAA CGTATGATTT CGTGCTCACG GCTCCGGTAC CGGTCATTTC CGGCTTGTAT TCCGAGTTTG TGAAAGCCAA TGGAACGGTC GTAATCAATG GCGATTACTT CTATAATATC AAATCGGTGA AGCTCGGCAA TACCGCATTG CAGGTGGTGA GCTCCAATGT GAAGCAAATC ACAGCCAAAA TGCCCGCTAC TGCGCCGGTG GACGTGATTA CGGTGGAAGG GGAGTTCGGA ACGGCCAAAA CGGCGTTCAA AATGAACGAT GCCGTGACCG GAAACATGGT CAATTTCGAC GTGCCTGCTA CTACCTGGGA TGCAGCCGTA TGCTGGGGCG GCGCGCCTAT CGTGGCCGCT ACCGACGCAC AGGCCATTTC GGGCAAGTTT TCGAGGATCA AGCAAACCAA GCTGCCCGCA ACAGGTTATA ACGACGGCTG GGTATTCTCT ACCTGCTCCT TCGATTTCAA GCTTCCGGCA GGAGGCGCGG CGGACCGGCA GTTCAAATTT GAACACAATA TCGCAGAGCC ATGGAAAGCA GGTAAGTACG ATATTACCAT CACCGCCGAC GGCAAGGAGT ATGTGTACAC TTTCCAGCCC TGGAACTCTA CTGAATACGC TTCGTCCGGT TACCAGACCA ACGGATGGAG AACGGCGGTG ATCGAACTTT CCGAGTTCAA GAATTCTACC GGCTCTGCAA TTGCCGACGT GTCGAAAGTC TCCGACCTGA AAGTGTTGTT CAATACGCCG GATGAGACGA TCGCTTCGTT CAACGGCAGC GTGGACAATT TCCGGATCGT GAAAAAGTAA
|
Protein sequence | MNFKNICKTG LGLLLAAGML LTFQSCNDDD IDGAPSISNV RLLDPTKADS SLSAAEPGSL VVIQGQNLGS VLKVYFNDFE STFNSALGSN SNIIITIPAN APTKAVDAGV PNKIRVVTKG GETTYDFVLT APVPVISGLY SEFVKANGTV VINGDYFYNI KSVKLGNTAL QVVSSNVKQI TAKMPATAPV DVITVEGEFG TAKTAFKMND AVTGNMVNFD VPATTWDAAV CWGGAPIVAA TDAQAISGKF SRIKQTKLPA TGYNDGWVFS TCSFDFKLPA GGAADRQFKF EHNIAEPWKA GKYDITITAD GKEYVYTFQP WNSTEYASSG YQTNGWRTAV IELSEFKNST GSAIADVSKV SDLKVLFNTP DETIASFNGS VDNFRIVKK
|
| |