Gene Dfer_1571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1571 
Symbol 
ID8225142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1881264 
End bp1882433 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content54% 
IMG OID644929428 
Producthypothetical protein 
Protein accessionYP_003085980 
Protein GI255035359 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.023925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.759951 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTCA AAAATATATG CAAAACAGGC CTGGGGCTGC TGTTGGCGGC GGGTATGCTG 
CTGACGTTCC AGAGCTGTAA CGACGACGAC ATCGACGGCG CGCCGTCGAT CAGCAACGTA
CGCCTGCTCG ATCCGACGAA AGCCGACAGC TCGCTATCCG CCGCTGAGCC GGGCAGCCTG
GTCGTGATCC AGGGGCAAAA CCTGGGCAGT GTGCTCAAAG TGTATTTCAA TGATTTCGAA
TCGACGTTCA ACTCAGCATT GGGCAGCAAC TCGAATATCA TCATTACCAT TCCCGCCAAT
GCGCCCACCA AAGCGGTGGA CGCGGGCGTG CCCAACAAGA TCCGCGTAGT GACCAAAGGC
GGCGAAACAA CGTATGATTT CGTGCTCACG GCTCCGGTAC CGGTCATTTC CGGCTTGTAT
TCCGAGTTTG TGAAAGCCAA TGGAACGGTC GTAATCAATG GCGATTACTT CTATAATATC
AAATCGGTGA AGCTCGGCAA TACCGCATTG CAGGTGGTGA GCTCCAATGT GAAGCAAATC
ACAGCCAAAA TGCCCGCTAC TGCGCCGGTG GACGTGATTA CGGTGGAAGG GGAGTTCGGA
ACGGCCAAAA CGGCGTTCAA AATGAACGAT GCCGTGACCG GAAACATGGT CAATTTCGAC
GTGCCTGCTA CTACCTGGGA TGCAGCCGTA TGCTGGGGCG GCGCGCCTAT CGTGGCCGCT
ACCGACGCAC AGGCCATTTC GGGCAAGTTT TCGAGGATCA AGCAAACCAA GCTGCCCGCA
ACAGGTTATA ACGACGGCTG GGTATTCTCT ACCTGCTCCT TCGATTTCAA GCTTCCGGCA
GGAGGCGCGG CGGACCGGCA GTTCAAATTT GAACACAATA TCGCAGAGCC ATGGAAAGCA
GGTAAGTACG ATATTACCAT CACCGCCGAC GGCAAGGAGT ATGTGTACAC TTTCCAGCCC
TGGAACTCTA CTGAATACGC TTCGTCCGGT TACCAGACCA ACGGATGGAG AACGGCGGTG
ATCGAACTTT CCGAGTTCAA GAATTCTACC GGCTCTGCAA TTGCCGACGT GTCGAAAGTC
TCCGACCTGA AAGTGTTGTT CAATACGCCG GATGAGACGA TCGCTTCGTT CAACGGCAGC
GTGGACAATT TCCGGATCGT GAAAAAGTAA
 
Protein sequence
MNFKNICKTG LGLLLAAGML LTFQSCNDDD IDGAPSISNV RLLDPTKADS SLSAAEPGSL 
VVIQGQNLGS VLKVYFNDFE STFNSALGSN SNIIITIPAN APTKAVDAGV PNKIRVVTKG
GETTYDFVLT APVPVISGLY SEFVKANGTV VINGDYFYNI KSVKLGNTAL QVVSSNVKQI
TAKMPATAPV DVITVEGEFG TAKTAFKMND AVTGNMVNFD VPATTWDAAV CWGGAPIVAA
TDAQAISGKF SRIKQTKLPA TGYNDGWVFS TCSFDFKLPA GGAADRQFKF EHNIAEPWKA
GKYDITITAD GKEYVYTFQP WNSTEYASSG YQTNGWRTAV IELSEFKNST GSAIADVSKV
SDLKVLFNTP DETIASFNGS VDNFRIVKK