Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1567 |
Symbol | |
ID | 8225138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 1875624 |
End bp | 1876259 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644929424 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003085976 |
Protein GI | 255035355 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAATT ATTGCATTTT TGTCCTAACC CGCACCCACC TCATGACAGA CATTACTCAT CAGGATTCAG ACCTTTGGTG CCTTGTCAGA GAGGGGGATG AAAGTGCCTA CGGGGTCCTT TTCAAAAAAT ATTATCCCAC ACTCGTAAGC TACGGCAAGT CGCTCACAGC CCGTGAGGGA CTGGCGGTCG ATTGCGTACA GGAGGTTTTT ATGGAGGTTT GGCTATACCG CCAGAACCTT GCACTGCCGT CGTCTGTCCG TGCTTACCTG CTCGCCGGTG TGCGTAAGCG AATCGCCCGG CGCCTCGAAC GCGACCATAT TTTCAAGCAT GCCCAGGCTG TCGAAGACGC CGATTTCTGC TTTCATTTCA CGCCATTGGA CGAAATGATC TCCGACGAGG AAACGCGCCG GCAGGTTTAT CAGCTCAATG TATTGCTTAA CCAACTGCCT CCCCGGCAGA AGGAGGCCAT TTACCTCCGC TATCATCACG AACTGGAAAT CGACGAGATC GCCCGCCTGA TGCAGATCAA TCCCCAATCC GCTTCCAATC TTCTCCACCG CGGTATCAAG CACATTCGCG GCGCGTGGGT GGGCGAGTTC CATTCGTTAG TGCTGCTCTT TCCGCTGCTT TTCTGA
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Protein sequence | MHNYCIFVLT RTHLMTDITH QDSDLWCLVR EGDESAYGVL FKKYYPTLVS YGKSLTAREG LAVDCVQEVF MEVWLYRQNL ALPSSVRAYL LAGVRKRIAR RLERDHIFKH AQAVEDADFC FHFTPLDEMI SDEETRRQVY QLNVLLNQLP PRQKEAIYLR YHHELEIDEI ARLMQINPQS ASNLLHRGIK HIRGAWVGEF HSLVLLFPLL F
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