Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1495 |
Symbol | |
ID | 8225066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 1784722 |
End bp | 1785270 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644929354 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003085906 |
Protein GI | 255035285 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.420653 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.312522 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTTA AATCTCTTTC GGACCAACAC CTCGTCGACG CAATGCGCCA CGACGACGGC ATGGCATTCC GGGAGATTTA CCAGCGCTAC TGGAAAAAAA TGTACCTGCT CGCACTCCGC AAGGTGGACG ACCGCGAAGC AGTCGAAAGC ATCGTCCAGG ATGTGTTCCT GCGACTTTGG GAGCGCCGCG ACCTTTTGCA GATCGACAAC CTCGAAGCCT ACCTGATCAC GTCGGTCAAA TATTCGTGCA TCAACCATTT CAAATCGGCC ATGGTGCGCG AGAAATACAT GGCACACGCA TTCGCCGGCT ATTCCGACTC CATTTGCTCC ACCGAAGAGC AGCTCAATGC AAGCGAGCTC ATGCGGAACA TCGAGGAGCG CCTCAGCCAT TTTCCCGAAA AAGCCCAGAC CATCTTCCGC CTCCACCGCC TCGAAAACCA ATCCACCCGC GAAATCGCCT CCCAAATCCA AATGCCCCAA CGCACCGTCG AGCATCACCT AAGCTTGGTA GTGAAGGCAT TGCGGGTTTA TTTAAAGGAT TATTTTTGA
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Protein sequence | MNLKSLSDQH LVDAMRHDDG MAFREIYQRY WKKMYLLALR KVDDREAVES IVQDVFLRLW ERRDLLQIDN LEAYLITSVK YSCINHFKSA MVREKYMAHA FAGYSDSICS TEEQLNASEL MRNIEERLSH FPEKAQTIFR LHRLENQSTR EIASQIQMPQ RTVEHHLSLV VKALRVYLKD YF
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