| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1437 |
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| Symbol | |
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| ID | 8225008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1698967 |
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| End bp | 1702482 |
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| Gene Length | 3516 bp |
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| Protein Length | 1171 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644929296 |
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| Product | membrane-bound dehydrogenase domain protein |
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| Protein accession | YP_003085848 |
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| Protein GI | 255035227 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3828] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02604] putative membrane-bound dehydrogenase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.223688 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0591317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAAT CAATACTGAT ACTGGCCATT CTTCATCTGC TTTTTGTGGG ATGCGCGCGG
AAAAAAGGAA CCGTACAAAC CCCGACGGCC CCGGCGGAAA CCGGCAGCGG TCGGCGGATC
GAACTGCTTT TCCTCGGGCA CGACAGCCGG CACCATTTTT CGGAGAAATA TTTCCCGATG
CTCTCGCTGC CGCTGTTTCA GAAGGGCATT AATCTTACCT ACACCTCCGA CCCGAATGCA
TTGAACACCG AAAACCTCGC GCGTTACGAC GGTGTGGTGA TTTATGCCAA CCATAACACC
ATCACGCCCG CACAGGAAAA TGCCTTGAAA ACCTTTGTGG AGGGCGGTAA GGCGCTTATA
CCGCTCCACT CGGCTTCTTT TTGCTTTCAG AATTCGGATT GGTATATCAA AGCGGTGGGC
GGGCAGTTCA TTTCGCATAA ATACGGTACG TTCACGGCGC CGGTGGTGAA AGCAGACCAC
CCGGTGATGA AAGACTGGAA GACGTTCGAA ACCTGGGATG AGACATACGT ACATTCTAAG
CTTAACCCGG ACATCGTCGT GCTGCAAGAG CGCGTGGAAG GTGACCACCA CGAGCCCTGG
ACCTGGGTGC GCACGCAGGG CAAGGGGCGC GTGTTTTACA CCGCATACGG CCACGACGAG
CGCACTTGGA AGCAGTCTGC ATTCCAGGAG TTGGTCGCCA ACGGCATCAT GTGGGCCGTA
AGCGACGAGG CGAAGGAGCG TTTGAAAAAA TTCAATTTAA CCAAACCCAC CTACACCGAC
GCCAATGTCC CCAACTACGA AAAGCGCGAC CCGGCACCGA AATTCCAGCA GCCGCTGTCT
CCCGCCGAGT CGCAGAAACT GACGCAGGTG CCGGTCGATT TCGAGCTGCA ACTCTTCGCC
TCCGAGCCGG ACATTGTGAA GCCCATTGCA ATGGCCTGGG ACGAGCGTGG ACGGTTGTTC
GTAGCCGAAA CGCAGGATTA CCCCAACGAA GTGCGCGACC AGGACGGCGT GGGCAAGGAC
CGTATCAAGA TCTGTGAAGA CACAGACGGC GATGGCAGAG CCGATAAATT CACCATTTTC
GCCGATAATC TCAATATTCC GACCAGTTTG GTATTTGCCA ACGGCGGGCT CATCGTAGCG
CAGGCACCGC ATTTCATATT CCTGAAAGAC ACCAACGGCG ACGACAAGGC CGATATCCGC
GAGAACATTA TCTCAGGCTG GGGCAAAAGC GACACGCACG CCGGGCCATC GAATTTGAAA
TATGGATTGG ATAACAAAAT ATGGGGCGTG CTGGGATACG CCGGGTTTCG CGGCACGAAC
GCTGGTAAGC AGCTGAATTT CAGTCAGGGT ATTTATCGCT TCGACCACGA CGGAAAAAAC
CTGGAATACA TTGGCCGCAC GTCCAACAAC ACCTGGGGCC TGGGCTTTTC GGAGGAGTTT
GAAGTGTTTA TTTCAACAGC GAACGGCAAT TACAGCGGGC ATTTCGCCAT GCCGCTTGAA
TATGCAAAAC GCTCGGTAGC AGACGGTTCG GGTAATACGG TTTACAAACT GGACTCGCAT
TATGAAATGA ATTACCTCAC GCCTGCATTG CGCCAGGTGG ACTTTCATGG CGGGTTTACA
GCCGCGGCGG GCCATAATTT GTACACAGCC CGTAACTTCC CGAAATCGTA TTGGAATGCG
ACGGCGTTCG TCTGCGAGCC CACCGGGCGA CTGCTTTACC GGGCATTGCT GAAACCGAAA
GGCGCCGGTT ACAAAGAAAA AAACGGGTTC AACCTGCTGG CAAGCGCCGA CGAATGGTTC
TCGCCGGTAC ACGCGGAAGT GGGCCCGGAC GGTGCCGTGT GGGTGGCGGA CTGGTACAGT
TTCATCATCC AGCACAACCC TACCCCGCGC GGATTCGAGA ATGGCAAGGG CAATGCATAC
ATTAACCCGC TGCGCGACAA TCAGCACGGA CGTATATACA GGGTCGTTTG GAAAAACGCA
AAACAAACAC CTTATCCCAA ACTCGACAAA AATGATGCGG CCAGTCTGGT CGCAGGCTTG
AAAAACGACA ACATGTTCTG GCGTACGACG GCGCAGCGGC TGATCGTCGA GGGAAAGCAT
ACCTCGGTGG TACCGGAGTT GATTAAGATG GTCAACGACC AGTCGGTAGA TGAAATCGGA
TTGAACAGCC CCGCCGTGCA TGCATTATGG ACGCTCGACG GCCTTGGCGC ATTCACCGGC
CCGAATGAGG AGGCCTATCA CACCCTCGTG CGCGCCATGC GCCACCCGGC GGCGGGCGTG
CGAAAAACAG CGGTAAAATT ACTCCCACGC AACGACAAGG CCCTTTCTGC ATTGAAATGG
ACCAACTCGC TCAACGACCC CGACCTGAAA GTGAGGCTCG CCACCGTGCA CGCCCTCACC
GATCTGCCCG CCTCCGATGA AATAGGCCGC ATGCTTTACC TCGCCGGCCA GGATTCGCAG
AATGCCGCCG ACGAATACCT TGCCCAGGCC ATTTTTTCAG GGGTTATCAG GCACGAAAGC
GGTTTCAAAG CCGCAGCGGC GAAGCTGAAA GATTCGACAT TGACGGCCCG GATCGAACGC
GGGCTGGTGG AAGAGACTTA TATGCTCAAT CTTTGGGCGC CGCCTATTTA CCCACCGGTG
ATTTCACATA AAGAATTGAG GATCAAAGCG ATTATTACCA AGGCACAGGA AGATCTATCC
GGTGTGGTGG TGTCGCAGGG CAACCGGCAG AATGGGTACA GCCTGTACAT GCAGGATGGA
AAGCTGCATT GGCTGGTGCG GCAGAATGGT CAATCCTACC AGGTCACCTC CACGCGAAAG
CTGCCCGACG AGCGTTTTAC GGCTTACGCC ACCCTTTTGG AAGGCGGTAA AATGACGCTG
GCCATTGAGG ACGAAACGCC GGTAACAGCC AACGCGGCAG GCCTTTTCCA TCAGCCATTC
ACACCGGACG ACATCCGCCT GGGCCGCGAC CTCCGCGAGG GCAACCAGGT AGGCGAATAT
GCAGATAATG CCCGCCTGCG CGGCTGGCTC GACATCAAAA GCACCTTACA GCTGAACCAG
GTCGTTCATA ATCAAGAAGA TAAGAAACTA TCCCGCACCC ATACCGAAGC ACCGGTTGAA
ATACTGAAAG GAAAAGGCAC GCCGGTAACT GTGAAGCTGA AAGTGATCGA GCATGAAATG
AAGTTTGACC AGAAAACTTT CACGGTAAAG CCTGGCCAGA AAGTGACGAT CCAGTTCACA
AACCCGGATT TTATGCAACA TAACCTGCTC ATTATTAAAT CCGGAACATT GGAAAAAGTA
GGCAATGCGG CCGACCTGCT GGCGCGGGAG GCGAACGCGA TCGCGCTCAA CTACGTACCC
AAAATGCCCG AAGTACTGCA CGCAACGGAA CTGGTGAGCC CCGAGGGCAA TGCCACGTTG
GTATTCATCG CGCCCGACAA GCCCGGCGAT TACCCGTTCC TGTGCACCGT ACCGGGCCAT
TGGCGGATCA TGAATGGTAT TATGAAAGTG CAATAA
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| Protein sequence | MRKSILILAI LHLLFVGCAR KKGTVQTPTA PAETGSGRRI ELLFLGHDSR HHFSEKYFPM
LSLPLFQKGI NLTYTSDPNA LNTENLARYD GVVIYANHNT ITPAQENALK TFVEGGKALI
PLHSASFCFQ NSDWYIKAVG GQFISHKYGT FTAPVVKADH PVMKDWKTFE TWDETYVHSK
LNPDIVVLQE RVEGDHHEPW TWVRTQGKGR VFYTAYGHDE RTWKQSAFQE LVANGIMWAV
SDEAKERLKK FNLTKPTYTD ANVPNYEKRD PAPKFQQPLS PAESQKLTQV PVDFELQLFA
SEPDIVKPIA MAWDERGRLF VAETQDYPNE VRDQDGVGKD RIKICEDTDG DGRADKFTIF
ADNLNIPTSL VFANGGLIVA QAPHFIFLKD TNGDDKADIR ENIISGWGKS DTHAGPSNLK
YGLDNKIWGV LGYAGFRGTN AGKQLNFSQG IYRFDHDGKN LEYIGRTSNN TWGLGFSEEF
EVFISTANGN YSGHFAMPLE YAKRSVADGS GNTVYKLDSH YEMNYLTPAL RQVDFHGGFT
AAAGHNLYTA RNFPKSYWNA TAFVCEPTGR LLYRALLKPK GAGYKEKNGF NLLASADEWF
SPVHAEVGPD GAVWVADWYS FIIQHNPTPR GFENGKGNAY INPLRDNQHG RIYRVVWKNA
KQTPYPKLDK NDAASLVAGL KNDNMFWRTT AQRLIVEGKH TSVVPELIKM VNDQSVDEIG
LNSPAVHALW TLDGLGAFTG PNEEAYHTLV RAMRHPAAGV RKTAVKLLPR NDKALSALKW
TNSLNDPDLK VRLATVHALT DLPASDEIGR MLYLAGQDSQ NAADEYLAQA IFSGVIRHES
GFKAAAAKLK DSTLTARIER GLVEETYMLN LWAPPIYPPV ISHKELRIKA IITKAQEDLS
GVVVSQGNRQ NGYSLYMQDG KLHWLVRQNG QSYQVTSTRK LPDERFTAYA TLLEGGKMTL
AIEDETPVTA NAAGLFHQPF TPDDIRLGRD LREGNQVGEY ADNARLRGWL DIKSTLQLNQ
VVHNQEDKKL SRTHTEAPVE ILKGKGTPVT VKLKVIEHEM KFDQKTFTVK PGQKVTIQFT
NPDFMQHNLL IIKSGTLEKV GNAADLLARE ANAIALNYVP KMPEVLHATE LVSPEGNATL
VFIAPDKPGD YPFLCTVPGH WRIMNGIMKV Q
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