Gene Dfer_1433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1433 
Symbol 
ID8225004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1692067 
End bp1693023 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content59% 
IMG OID644929292 
Productmolybdopterin dehydrogenase FAD-binding 
Protein accessionYP_003085844 
Protein GI255035223 
COG category[C] Energy production and conversion 
COG ID[COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.314067 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0349544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGTG ACAATCCGGA AGCGCAGTAC ATTGCCGGCG GTACCAACCT GATCGACCTC 
ATGAAGCGGG GCGTTACCTC GCCCGCCAAA CTGATTGATA TTAATCATCT CCCATTAAGA
AAAATAGAAC ACCGCAACGA CCGTGTCCGC ATTGGCGCAT TAGCCCTCAA TAGCGACGTG
GCGGAGCATA GGCTGATCCA AACGCGCCAG CCGCTTCTCG CCCAGGCATT GCTGGCGGGC
GCATCGGGCC AGTTGCGTAA CATGGCCACC GTGGGCGGGA ACCTGCTCCA ACGGACGCGA
TGCAGCTATT TTTACGACCT CGCATTACCC TGCAACAAGC GCAAGCCCGG CTCGGGCTGT
GGCGCGGAAG AGGGCATTAA CCGCACGCAC GCCATATTTT TCGCGGGAAA TGGTTTCGGG
GGGATCGAAA AATCCTCCTG CCTGGCCGTT CACCCGAGCG ATATGTGCGT GGCCCTCACC
GCTTTGGAAA CAACCGTGGT CGTGAACGGC CCGGATGGCG AGCGGCGGGT GATGATGAAA
GATTTCCACC GGCTAACCAC CCAGCAACCC GAGCTCGATA CCAACCTGCG CCCGGGTGAG
CTGATCACGG CCATCGAGGT GGAGGACAAT GCATTTGCCC GGCACAGCCA TTACCTGAAA
GTGCGCGACC GCGCGTCTTA CGCCTTTGCA CTGGTGTCGG TGGCTGCTGC GTTGCAAATT
GACGGCGGCA AGATCTGGGA CGCGCGCATG GCACTCGGCG GTGTGGCGCA CAAGCCGTGG
CGCTACTGGG CCGTGGACCT GATGCTGAGA GGGCAGGCGC CCTCGGAGAA GCTTTTCAGG
GAAGTTGCGG AGCATGAAAT GAAGAGCGCC AAAGCCACGG AGCAAAATGC ATTCAAAATC
AGACTTACTT CCAATGCGAT CGTTGCGGCG TTGAAACTCG CAGCGGGGAT TTCCTAA
 
Protein sequence
MAGDNPEAQY IAGGTNLIDL MKRGVTSPAK LIDINHLPLR KIEHRNDRVR IGALALNSDV 
AEHRLIQTRQ PLLAQALLAG ASGQLRNMAT VGGNLLQRTR CSYFYDLALP CNKRKPGSGC
GAEEGINRTH AIFFAGNGFG GIEKSSCLAV HPSDMCVALT ALETTVVVNG PDGERRVMMK
DFHRLTTQQP ELDTNLRPGE LITAIEVEDN AFARHSHYLK VRDRASYAFA LVSVAAALQI
DGGKIWDARM ALGGVAHKPW RYWAVDLMLR GQAPSEKLFR EVAEHEMKSA KATEQNAFKI
RLTSNAIVAA LKLAAGIS