Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1415 |
Symbol | |
ID | 8224986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 1668618 |
End bp | 1669205 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644929275 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003085827 |
Protein GI | 255035206 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0183042 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.106327 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACCAC GCATTACTCC CGATGAAGCT CAGAAACTTT GGAACGACTA CCAGTCGGGT GATATGTACG CGCTGGCGAA CATCATGCAG GGCTACTACG CCGACCTGTT CCATTGGGGA TTGCGGCTGC ACGGCGAGCG CGAGTTTGTG AAGGACTGCA TTCAGGACAT GTTTGTGAAC CTGTGGCGGA TGCAGCAGTC GTCGGGCGCG GAAGTGAAAG GGCCCGCGGG AGTGGTCACC AATGTCCGTT CTTATCTGCT GGTTTCGCTC AAAACGCGGA TTCTGCGGGA GTTATCAAAA AAGCATGTGA CGCACCAATC CATGCTTTCG GATGAATACT CGTTTTCCGT GGAGTTTTCG TCCGATCTCC GGCTGATTGA CGAGGAGCAT GAAATTTACC AGGTGAGAAA GCTGGAAGGA ATACTGAATA GTCTCTCCGG CCGGCAGAAG GAGCTGATTT ACCTCCGGTT TTACCAAAGC CTGAGCTTCG AACAGATCGC CGAGGTGATG AACCTGAGCA GGCAGTCGGT TTACAATCTT TTGCAAAAAT CGCTGGGGAG CCTGCGAAAG CACTACCACG TGAGCTGA
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Protein sequence | MRPRITPDEA QKLWNDYQSG DMYALANIMQ GYYADLFHWG LRLHGEREFV KDCIQDMFVN LWRMQQSSGA EVKGPAGVVT NVRSYLLVSL KTRILRELSK KHVTHQSMLS DEYSFSVEFS SDLRLIDEEH EIYQVRKLEG ILNSLSGRQK ELIYLRFYQS LSFEQIAEVM NLSRQSVYNL LQKSLGSLRK HYHVS
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