Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1391 |
Symbol | |
ID | 8224962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 1640925 |
End bp | 1641968 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644929251 |
Product | ApbE family lipoprotein |
Protein accession | YP_003085803 |
Protein GI | 255035182 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0161542 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAACCG GAATACTCAG CCTGATGGGC AAATACCGGC ATAGGGCTGG GCTAGCGATG GTACTGATGT GCCTGTCAAT GAGTGCGTTA ATGCCTGACA AACTGCGCAC TTTCCAAATC ACCGGCGAGG CGCAGGGGAC CACCTATGCC ATTACTTACT ATGCCAAACG GCAGCTGGCT ACCAAAAGGG AGATCGACAG TGCTTTTAAA AGCCTCGACG CGTCCCTGTC CATTTACGAC CCCAGCTCGC TGATCAGCCG TTTCAATGCT TCCCAAAAGG GCATTGAAAT GGACCTTCAT TTTTCGAAGG TGATCGCAAA ATCCTTGCAG ATCTATCGCG AAACGGGCAG CCTGTTCGAT ATAACGGTGT ACCCGCTTGT GCGCGCCTGG GGGTTCGGCA CCGCGGCCCC GGTGGCCATG CCCGACAGCG CCAGCATCCG TACGCTTTTG GAATGTGTAG GTTCGGATAG GCTGGAAATC CAGGGTAACC GGCTTTTGAA AACTGGACCG TGCGTGCAGG TCGATGTGAA TGGGATCGCG CAGGGCTATT CGGTAGATGT CATTGCGCGG TTTCTGGAAG CGAGAGGCAT TGCCGATTAC ATGGTGGAAG TGGGAGGGGA GATCCGGACG CGCGGCCTGA AACACCCGGG TGGAGAGCCG ATGCGGATCG GGATTGAAAC ACCCTCGGCG ACCGGCTTTG CCGCGCCCGT GATCCGCGAG GTGATCAGCA TTGGCGACGG GGCCGTTACC ACGTCGGGCA GCTACCGGAA GTTCCGCGAA TCGGGCGGTG TGCGGCTTTC CCACATCATC GACCCGGCAA CTGGCTTCCC CGTCCGGCGC GAGATCATCA GCGCAACCGT AGTAGCACCC GACGCGATCA CCGCCGACGG TTTCGACAAT GCACTGCTCG CTGCTGGCAT CGACGGGGCG TTTGAAATAC TCAAAACTCA TCCTGAAATG CAGGTCTACC TGATCTACAA AAAGCCCGAC GGCACAATTG CGGACACGGC TTCCGCTGGC TTTGGCCGCT ACATTGTCCG CTGA
|
Protein sequence | METGILSLMG KYRHRAGLAM VLMCLSMSAL MPDKLRTFQI TGEAQGTTYA ITYYAKRQLA TKREIDSAFK SLDASLSIYD PSSLISRFNA SQKGIEMDLH FSKVIAKSLQ IYRETGSLFD ITVYPLVRAW GFGTAAPVAM PDSASIRTLL ECVGSDRLEI QGNRLLKTGP CVQVDVNGIA QGYSVDVIAR FLEARGIADY MVEVGGEIRT RGLKHPGGEP MRIGIETPSA TGFAAPVIRE VISIGDGAVT TSGSYRKFRE SGGVRLSHII DPATGFPVRR EIISATVVAP DAITADGFDN ALLAAGIDGA FEILKTHPEM QVYLIYKKPD GTIADTASAG FGRYIVR
|
| |