Gene Dfer_1313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1313 
Symbol 
ID8224884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1545320 
End bp1546537 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content54% 
IMG OID644929174 
ProductPropeptide PepSY amd peptidase M4 
Protein accessionYP_003085726 
Protein GI255035105 
COG category[S] Function unknown 
COG ID[COG3182] Uncharacterized iron-regulated membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCAAA AAAAGACGGC GCTGGGAAAG TTCATAGGAA CATTGCACCT CTGGCTGGGG 
CTGGCGTCCG GACTGGTCAT TATCGTGATC GGCCTCACCG GTGCTATCTA CGTTTTTACA
GATGAGATCA AGCCGCTCGT GTACCGCGAC CGGCTTTTTA TCCAACCCGA AAATAAACCC
AAACTCCCGC TAAGCCAGCT GCTGGCCGTA GCACAGGAGG CGGTCGGTCC CAACCGGCCC
GTCACGCGCG TGGAAATATC CTCCCAGCCC GACCGAACGT ACATTTTCAG GGCATTGAAG
GTCGATAAGG AAGGGTTTTC GCATTGGGAT TATTACAAAT ACTACTGGCG GGCATATGTG
AATCCGTATA ATGGAAAGGT GGTGAAGCTG GAAGACAGCC GTAACGAGTT TTTCAACCTT
GTGCTGGGCT TGCATATGCG GATGTTGTTC GGTGAAAAAA TCGGTCATGC CGTGGTAAGT
TACTCCGTGC TTGCCTTTGT GCTGATCCTG ATTTCGGGAC TGGTGCTTTG GTGGCCTTCG
AAATGGAGCA AATCTAATGT AGATAAGAGC TTCAAAATCA AATGGAACGC CAAATGGAAG
CGCGTAAACT ACGACCTGCA CAATGTGCTG GGCTTTTATG CCTGCGTGAT CCTGCTCGTT
TGTGCGCTTA CCGGACTGGT TTGGGCGTTC GAATGGTTTG AAACAGGTGT AAAGACCGTC
GCCGACGGCG GCACGCTCGC CAAAGTGCCG GCCGTTTTTT CGGATACCAC CCAACAAAAG
GACGCAGCCG CCGTGGATCG CATTTTCAGC CAGTTACAGG CCGACAAGCC CGACGCCCAC
GGTTACCTGA TTAACTTCCC TGTTAAAGGC AAATTGCCCC TCAATACATC CACCTATCTC
ACGGCCAGCA ATCGGTACGA CCGCATTCAG GGTCAGTACG ATCAGTTTAC CGGCGCGCAG
CTACGCTCGC GATCGTTCGG TGAACTTACC AATGGCGAGC AGCTGTACGC ATTGAATTTC
GACCTGCACG TGGGCGCCTG GGCAGGAATG CCGGGCAAAA TCCTCACTTT TTTTGCAGGG
CTCATCTGCG CCAGTTTGCC CGTAACCGGG ATTGTGATCT GGTGGGGACG CCGCAAAAAG
GAAAGCAAGC CACGGAAAGG AGCGAAGAGC CCGCTCGCAT CGCCGAAACC GGCTCACCGC
CTCAGCCGCA CCATATAG
 
Protein sequence
MSQKKTALGK FIGTLHLWLG LASGLVIIVI GLTGAIYVFT DEIKPLVYRD RLFIQPENKP 
KLPLSQLLAV AQEAVGPNRP VTRVEISSQP DRTYIFRALK VDKEGFSHWD YYKYYWRAYV
NPYNGKVVKL EDSRNEFFNL VLGLHMRMLF GEKIGHAVVS YSVLAFVLIL ISGLVLWWPS
KWSKSNVDKS FKIKWNAKWK RVNYDLHNVL GFYACVILLV CALTGLVWAF EWFETGVKTV
ADGGTLAKVP AVFSDTTQQK DAAAVDRIFS QLQADKPDAH GYLINFPVKG KLPLNTSTYL
TASNRYDRIQ GQYDQFTGAQ LRSRSFGELT NGEQLYALNF DLHVGAWAGM PGKILTFFAG
LICASLPVTG IVIWWGRRKK ESKPRKGAKS PLASPKPAHR LSRTI