Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1307 |
Symbol | |
ID | 8224878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 1537708 |
End bp | 1538535 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644929168 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003085720 |
Protein GI | 255035099 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.274606 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAAAA CAATTTTTAT CACCGGCGCT TCCAAAGGAT TCGGCCGTAT ATGGACCGAG GCTTTTTTGG AAAGAGGGGA CAAAGTAGCG GCCACCGCCC GCAATACTGA AACCCTGGCC GACCTCGCCG CGCAATACCC CGATACATTA CTGCCCATTC AGCTCAATGT GAACGACCGC GCGGCCAGCT TCACCGCCGT GAACCGGGCC GCCGCCCATT TCGGATCGCT CGATGTCGTG ATCAACAATG CCGGTTACGG CTTGTTCGGG GCGATCGAGG AAACCAGCGA ACAGCAGGCC CGCGACCAGA TCGAAACCAA CGTATTCGGT TTGCTATGGG TGACGCAGGC CGCCATTCCC GTGATGCGGG CGCAGGGCGG CGGGCATATC CTGCAAGTAT CTAGCGTGCT GGGCGTGGCA ACACTGCCGG TGCTGGGCCT GTATAATGCT TCCAAATGGG CAGTTGAGGG CCTTAGCGAA ACACTGGCTT CGGAAGTGAA AGACTTTGGT ATTAAGGTTA CCATCGTGGA GCCGAACGGC TTCTCTACCG ACTGGGGCGG CGCTTCGGCC TTCCACACCG AGGCTAATCC ATTGTATGAA GACGTGAAGG CCTCGCTCTA CGCGGGACTC ACACCCGACA CCATCGGCAA GCCCGAAGCA ACCGCGGAGG CCATTCTGAA AGTGGTCGAC GAAGAAAATC CCCCATTGCG AATTTTCCTC GGAAAAGTAG GGTTTCCATG GTTGAGCCAG GTATATGCCG ACCGCCTCGC GACCTGGGAA GAATGGAAAG AAGTAGCGGA CGCCGCGCAC GGTCATGCAA CTGTCTGA
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Protein sequence | MSKTIFITGA SKGFGRIWTE AFLERGDKVA ATARNTETLA DLAAQYPDTL LPIQLNVNDR AASFTAVNRA AAHFGSLDVV INNAGYGLFG AIEETSEQQA RDQIETNVFG LLWVTQAAIP VMRAQGGGHI LQVSSVLGVA TLPVLGLYNA SKWAVEGLSE TLASEVKDFG IKVTIVEPNG FSTDWGGASA FHTEANPLYE DVKASLYAGL TPDTIGKPEA TAEAILKVVD EENPPLRIFL GKVGFPWLSQ VYADRLATWE EWKEVADAAH GHATV
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