| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1209 |
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| Symbol | |
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| ID | 8224780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1433204 |
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| End bp | 1435975 |
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| Gene Length | 2772 bp |
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| Protein Length | 923 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644929071 |
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| Product | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase |
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| Protein accession | YP_003085623 |
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| Protein GI | 255035002 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1049] Aconitase B |
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| TIGRFAM ID | [TIGR00117] aconitate hydratase 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.100378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0070458 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATATCT ATCAGGACTA CATTAAAGAG ATTGAAGAAA GAAAAACCCA GGGGCTTCAC
CCGAAGCCGA TTGACAGTGC CGAATTGCTG GGCGAAATCA TCGCTCAAAT CAAAGATCAG
GCGAACGAGT ACCGGGACGA CTCTCTCAAA TTTTTTATTT ACAATACATT ACCAGGTACT
ACGAGTGCTG CCGGCGTGAA AGCCCGGTTT TTGAAGGAAA TCATCCTCGG CGAATCCGTA
GTGGAGGAAA TATCACCTGC ATTTGCATTC GAGCTGCTTT CGCACATGAA AGGCGGGCCG
TCCATCAGTG TATTGCTCGA TCTGGCCCTG GGCGAAGATG CTGAAATCGC AAAACAAGCC
GCCGACGTTC TGAAAACACA GGTTTTCCTG TACGACGCCG ACACCGACCG GCTCAAAGAA
GCATTCAAAA GCGGAAGCGA AATCGCGAAA GAGATTCTGG AAAGCTACGC GAAGGCCGAG
TTCTTCACCA AGCTGCCCGA AGTTCCCGAA GAAATCAAAA TAGTGACGTT TATCGCCGGC
GAGGGCGACA TTTCGACCGA TTTGCTCTCT CCCGGCAACC AGGCGCACTC GCGCTCCGAC
CGTGAATTGC ACGGCCAATG CATGATCACA CCCAAAGCTC AGCAGGAGAT TAAGCTGTTG
CAGGAGGAGC ATCCCGACAA GAGCGTGATG CTGATCGCTG AAAAAGGTAC AATGGGTGTG
GGTTCATCCC GGATGTCGGG TGTGAACAAC GTGGCGCTCT GGACCGGCAA GCAGGCCAGC
CCATACGTTC CATTCGTGAA CATTGCGCCG ATCGTGGGCG GTACCAACGG CATTTCGCCA
ATTTTCCTCA CAACCGTAGA CGTTACGGGC GGTATTGGTA TCGACCTGAA AAACTGGGTT
AAGAAAACAG ACGAGCATGG TAATGTGGTC CGTAACGAAA ACGGCGATCC CGTGCTGGAA
GAAGTGTACT CGGTTGCTAC CGGCACTGTT CTTACCATTA ATACCAAAAC CAAGAAACTT
TACAACGGCG AGCAGGAGCT GATCGATATT TCAAAAGCGC TCACGCCGCA GAAGAAGGAA
TTTATCCGCG CAGGCGGCTC TTATGCCATT GTGTTTGGTA AAAAAATCCA GACAGTTGCC
GCGAAAATCC TTGGTATCGA GCCTACGCCG GTTTTTGCTC CTTCGAAAGA GATTTCGAAT
GAAGGACAGG GATTGACGGC GGTTGAAAAG ATCTTTAATA AAAATGCCGT CGGCGTTACG
CCGGGCAAAA TCCTGCACGC CGGCTCGGAC GTTCGTGTGG AGGTAAATAT CGTCGGCTCG
CAGGATACGA CGGGGCTGAT GACCGCCCAG GAGCTGGAAT CGATGGCGGC TACCGTGATT
TCGCCGATTG TGGATGGAGC CTATCAGTCG GGTTGCCATA CGGCGTCGGT TTGGGACAAA
AAGGCGCAGG CTAACATTCC TAAGCTGATG AAGTTCATGA ACGACTTCGG CCTCATCACC
GCCCGCGACC CGAAAGGCGA ATACCATTCG ATGACCGACG TAATCCACAA GGTGCTGAAC
GACATCACAG TGGACGAATG GGCGATCATC ATCGGTGGCG ATTCCCACAC AAGGATGTCC
AAAGGTGTGG CCTTCGGTGC CGACTCGGGA ACCGTGGCCA TTGCACTTGC GACGGGCGAA
GCTTCCATGC CGATCCCCGA ATCCGTGAAA GTGACGTTCA AAGGCAGCAT GAAAGAGCAT
ATGGACTTCC GTGACGTCGT TCACGCAACC CAGGCTCAGA TGTTGCAGCA GTTTGGAGGT
GAAAACGTAT TCCAGGGCCG CATCATCGAA GTACACATTG GAACACTTCC TGCCGACCAG
GCATTTACAT TCACCGACTG GACCGCGGAA ATGAAGGCGA AAGCTTCTAT CTGTATTTCA
GAAGACGATA CGCTGATCGA ATCACTGGAA ATTGCGAAAA ACAGAATCCA GATCATGATC
GACAAGGGTA TGGAAAACCA CAAGCAAGTG CTGCAAGGGT TGATCAACAG GGCCGAAAAG
CGCATTGCCG AAATCAAATC CGGTGAAAAG CCAGCGCTTA CTCCTGACGT CAACGCGAAA
TACTATGCGG AAGTGGTGAT CGACCTCGAC GTGATCGTGG AACCGATGAT CGCCGACCCG
GATGTGAATA ATAAGGATGT ATCAAAGCGC TACACGCACG ATACGATCCG CCCGATTTCT
TTCTACGGCG ATGAGAAAAA GGTAGACCTC GGTTTTGTAG GCTCCTGCAT GGTGCACAAA
GGCGATTTGA AGATTGTTTC TCAAATGCTT AAAAACCTGG AAGAGCAGCA AGGCAAAGTG
GAATTCCACG CACCGCTTGT GGTGGCCGCG CCTACCTACA ACATCATCGA AGAGCTGAAA
AGCGAAGGCG ACTGGGATGT ATTGCAGAAA TACTCCGGTT TTGAATTCGA CGACAATGCC
CCGAAAGTAG CGGCACGCAC GGAGTACGAA AACATGATGT ACCTTGAACG CCCCGGCTGT
AACCTTTGCA TGGGTAACCA GGAAAAAGCG GCCAAAGGCG ATACGGTACT GGCTACTTCT
ACACGTCTGT TCCAGGGCCG GGTTGTGGAA GATTCGGAAC GCAAAAAAGG GGAATCGCTG
CTCGCATCCA CACCGGTGGT AGTGCTTTCG GCAATCCTGG GACGCATACC CAATATCAGT
GAATACAAAG CTGCGGTAGA AGGCATTGAC CTGACCAAGT TCGCACCACC CATCAAGACG
CTAAGCAGAT AG
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| Protein sequence | MNIYQDYIKE IEERKTQGLH PKPIDSAELL GEIIAQIKDQ ANEYRDDSLK FFIYNTLPGT
TSAAGVKARF LKEIILGESV VEEISPAFAF ELLSHMKGGP SISVLLDLAL GEDAEIAKQA
ADVLKTQVFL YDADTDRLKE AFKSGSEIAK EILESYAKAE FFTKLPEVPE EIKIVTFIAG
EGDISTDLLS PGNQAHSRSD RELHGQCMIT PKAQQEIKLL QEEHPDKSVM LIAEKGTMGV
GSSRMSGVNN VALWTGKQAS PYVPFVNIAP IVGGTNGISP IFLTTVDVTG GIGIDLKNWV
KKTDEHGNVV RNENGDPVLE EVYSVATGTV LTINTKTKKL YNGEQELIDI SKALTPQKKE
FIRAGGSYAI VFGKKIQTVA AKILGIEPTP VFAPSKEISN EGQGLTAVEK IFNKNAVGVT
PGKILHAGSD VRVEVNIVGS QDTTGLMTAQ ELESMAATVI SPIVDGAYQS GCHTASVWDK
KAQANIPKLM KFMNDFGLIT ARDPKGEYHS MTDVIHKVLN DITVDEWAII IGGDSHTRMS
KGVAFGADSG TVAIALATGE ASMPIPESVK VTFKGSMKEH MDFRDVVHAT QAQMLQQFGG
ENVFQGRIIE VHIGTLPADQ AFTFTDWTAE MKAKASICIS EDDTLIESLE IAKNRIQIMI
DKGMENHKQV LQGLINRAEK RIAEIKSGEK PALTPDVNAK YYAEVVIDLD VIVEPMIADP
DVNNKDVSKR YTHDTIRPIS FYGDEKKVDL GFVGSCMVHK GDLKIVSQML KNLEEQQGKV
EFHAPLVVAA PTYNIIEELK SEGDWDVLQK YSGFEFDDNA PKVAARTEYE NMMYLERPGC
NLCMGNQEKA AKGDTVLATS TRLFQGRVVE DSERKKGESL LASTPVVVLS AILGRIPNIS
EYKAAVEGID LTKFAPPIKT LSR
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