Gene Dfer_1043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1043 
Symbol 
ID8224613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1235205 
End bp1237115 
Gene Length1911 bp 
Protein Length636 aa 
Translation table11 
GC content53% 
IMG OID644928904 
Producthypothetical protein 
Protein accessionYP_003085457 
Protein GI255034836 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.234332 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.388844 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAA ATCTACGGTT CCGATTGTTC GTTTTCTCGC TGTTAATCTG GTTTACGCCG 
TTAACTTATG CCAACCACAT TGTCGGGGGC GAGCTGCAAA TGCGGCCGTC GGGAGGCGCC
GGTCGGTACG AAGTGACATT GATCCAGTTC TGGGATCAGA ACAACCTGAC CATCCCCCGC
CCCAACGTTT CCGGCAACCG CGACGAATTT GCGAATTTGT ACATTTACCA GAAAAGCAAT
AAGAGCTATA AAGCGACCGT CACCGTAGAT TATCTCAAAA CGGAACAGCT TACTTACCAG
AACCGCGCTT GCGCTAGCAT CCGGTCACTC AACACATCCA TCGGTTATTA CAGAGGAAGC
ATCTACCTCG ATCCGGCGAA ATTCAATCAT CCCGACGGAT ATTTTATTGT TTGGGAACGC
TGCTGCCGAA ATGACGATAT CAATAATATT GAAGATCCAG GCGACAGCGG AATGGTATTT
TACCTGGAAT TCCCTCCTGT GACCGTTGCT AATTCTTCAC CCGTTCTCGT CGAGCCAAAC
GGACAGTACA TTTGCAGCAA CCGGTCGTTT TCGATGAATA TGAGTGCGAC CGATGCCGAT
GGTGACGAGC TTCGTTACTC GATCGCCACT CCGATGCGCG GCAATACCGA CCCGAACAAG
TCTATTGGCG ACAGCCTTTC CAAAAGTTCC TACCCGCTGG TGAGCTGGTC GCGTGGTGTG
AGCATCACCA ATGCCATCCC CGGCCCAGGT CCGCTGCGGG TAGATGCCAC AGGTAAGGTC
ACGGTCACGG CCGGCGCACT CGGGCTGTAT GTATTCACCG TTCAGTGCGA GGAATTTAGA
AATGGCAGGC GGATCGGGGT GGTAAGGCGT GATTTTCAGC TGCTTGTAAT TGATTGCAAC
GACGATCAGC CCGAGCCACC TGTGATCAGG CAGAATGGCA ATGCTGTTGC CGAAGTGACT
TTTTGTCCGG AAATGCCGGT GGAATTGAGC ACGGACGATG CCGTGGATTG GTCGTACCAA
TGGCAACTGA ATGGACTCAA TATTTCCGGT GCGACGTCGG CGACCATTAT GGTCAAAGAT
TCGGGAAGCT ATTCGGTCGT GAAGAGTTAT ACCAAAAAGT GTTCACGCGA TACGGCGTCT
TCGGTAGTCC GGGCCACATT TGCCGAGCCG GTTGCCGCGG TGATATCTTA TGGTAAGTCA
ACGATTTGTG TGGAAGATTC AACCGTGCTG CTGGCCAACG ATGGTTTGAT CGGCGCAGAG
CAGACCTTAG TCTGGTACAA AAACGATGTG CAGCTGGAAG TGACAGACCC AATGCTGACT
GTGCACGAAC CGGGTCTATA CGTCGTCGCG ATTGATGATG AAGTTCCCGG CTGCCCGGGC
AGGGACACCG TCGAGATTAT CAGGGACGAC TTTGCGGTCG CATTGCCAGA TCGCAAGGCG
ATCCAGGAAG ATGGCCGCGA CTTCATCACT CCCGTCGTAA CGCCCGAGGC TGCATCCTAT
TCTTTCGCCT GGTCGCCGGG CGACGGGCTG TTGTCGGCGC AGGACGAAAA GGTCGCGCTT
ATTACCCCGG TCCGGGAGGA GGAGCTCTAT CACCTTACGG TTACATCAGC CGCTGGTTGC
ACCGTCGAGG ATAGTGTGCT CGTGTACATG ATGAAGCGGA TGTACATCCC TTCATCGTTC
ACACCCAACG GCGACGGCCG GAATGATACT TTCGAGATTT TCAATGCGCG TGAGCAAATT
GTACTAATGC GAATCTACAA TCGCTGGGGC GAGCTGATTT ACAAGACCGA GGGTTATGAG
CATCCTTGGG ACGGCACTTA TCGTAATGTT CCGGTGCCGG CGGGCAGTTA TCCTTATATT
ATCAGCACGG AAGCGCAGGA AATTCAGGGA ACAGTGCTTC TTTTGAAGTA A
 
Protein sequence
MMKNLRFRLF VFSLLIWFTP LTYANHIVGG ELQMRPSGGA GRYEVTLIQF WDQNNLTIPR 
PNVSGNRDEF ANLYIYQKSN KSYKATVTVD YLKTEQLTYQ NRACASIRSL NTSIGYYRGS
IYLDPAKFNH PDGYFIVWER CCRNDDINNI EDPGDSGMVF YLEFPPVTVA NSSPVLVEPN
GQYICSNRSF SMNMSATDAD GDELRYSIAT PMRGNTDPNK SIGDSLSKSS YPLVSWSRGV
SITNAIPGPG PLRVDATGKV TVTAGALGLY VFTVQCEEFR NGRRIGVVRR DFQLLVIDCN
DDQPEPPVIR QNGNAVAEVT FCPEMPVELS TDDAVDWSYQ WQLNGLNISG ATSATIMVKD
SGSYSVVKSY TKKCSRDTAS SVVRATFAEP VAAVISYGKS TICVEDSTVL LANDGLIGAE
QTLVWYKNDV QLEVTDPMLT VHEPGLYVVA IDDEVPGCPG RDTVEIIRDD FAVALPDRKA
IQEDGRDFIT PVVTPEAASY SFAWSPGDGL LSAQDEKVAL ITPVREEELY HLTVTSAAGC
TVEDSVLVYM MKRMYIPSSF TPNGDGRNDT FEIFNAREQI VLMRIYNRWG ELIYKTEGYE
HPWDGTYRNV PVPAGSYPYI ISTEAQEIQG TVLLLK