Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0969 |
Symbol | |
ID | 8224538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 1125675 |
End bp | 1126421 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644928829 |
Product | hypothetical protein |
Protein accession | YP_003085383 |
Protein GI | 255034762 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.000295525 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000492086 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAACCC AAGAGCAGAT ACTGAGAGAA CTGTCAGAAA TCAGGGAAGC TATTGTTAGA ATCGCGGGTA CACCAGCACT TCCGCCAGAA GAGCAATTCT CTGAAGCCTC ACTGGATAAA GTTGCCCTGG AATTAAAGAA GCTTTCCATC AAAAGAGGTG AATGGATCGA TGACAGGGAT CTGAGCAGAT ATTTCAAAGG GGTCTACAAT GGGGGAAGGT TCATCCGGGA AACGTTCGGA TTTAATGATT TTTTCAAGAA GGGAAAATCA TATTATTACC GGAAATCCAG CATTATCCGT TTATCCCAGG AATTGAAATC CCGAAATGTT GACTTGGCCC GATACATGGA GCTTAAAGAG AGTGAGGCAA AATTCCAGGA AAAAGTCTCC GCGGTCGCTG CCGCAAACAA AAAGCAAAAA AAGAAACCCC CATTTCAGTT ACCTGATTCC CTAAAAGACA TTACTACCGA AGACTTTCAT CCAGCAGTTG AAATTGTTGA AGCCGAACTG AGCAAGCTGC GTGAGCAGTT TACCAAAGAA AATCTTTCAA AATATATAGA TGTTTACGGT GGTCATGCCA TGATGAAATT CCGCTATCCA TTTTCAGGGT TTGCCGAAAA GGAGATAAAA TCCAAATGCA GGCGCTGGTG CGACCAATAC AACATGGCCT GCGATGCACT TTCGAAGTTG AGTGGAAAAG AGAAGAAATT TACCCCACCG GAAGACCCTA ATGCCTATGA ATTATGA
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Protein sequence | MKTQEQILRE LSEIREAIVR IAGTPALPPE EQFSEASLDK VALELKKLSI KRGEWIDDRD LSRYFKGVYN GGRFIRETFG FNDFFKKGKS YYYRKSSIIR LSQELKSRNV DLARYMELKE SEAKFQEKVS AVAAANKKQK KKPPFQLPDS LKDITTEDFH PAVEIVEAEL SKLREQFTKE NLSKYIDVYG GHAMMKFRYP FSGFAEKEIK SKCRRWCDQY NMACDALSKL SGKEKKFTPP EDPNAYEL
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