Gene Dfer_0775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0775 
Symbol 
ID8224344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp915513 
End bp916463 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content57% 
IMG OID644928646 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_003085200 
Protein GI255034579 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.909787 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.445044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCAGA AGCAACTGCA GTACCTGATC CGCCGCTACC GCGAGGGCAC CGCCACCCGC 
GAGGAACGCG AACTCCTGGA AATGCATTGG AAGCAAATGC TCGGCACCGA TGCCGACGAT
GGTCTATCCG AATCGCAGCG GTCGGAACAA GGGCAAGATC TCTTTCAGCA CATCATTCAT
ACGGTTCAGC AGCACGAACC GGGCTCGTTC CACCCGGTAA GGTCGTTTGG CCGGAACCGC
TGGGTAGTAA TGGCCGCCAG TCTGGTGGGT ATTCTATTGA TAGTCGGCGC CGCGCGGCTG
TGGTTGTTCC GTCCGGGACC GCTGGAATAC CGGACTGCCT ACGGCGAGCG AAAGCATATC
GTGCTGCCCG AGGGTTCCGT AGTCTGGCTC AATGGCCACT CCACCTTACG CTACGCCCCC
GATTCGCTGG GCAACCGCCA GGTGTGGCTC GATGGAGAAG CCCAGTTTTC GGTGCGGCAC
ACGGCCAATC ACAACAAGTT CGTGGTGCAT ATGGCTAACG AGCTGAACGT GGAAGTGCTC
GGTACGGTAT TCAATGTCGT AAACCGGCAT GGCGACGTGA ATGTCGTGCT CCGCTCGGGC
GCGGTACGCG TAGTGGATCA ATCGCGCCAA ACGCCGGACA TTGTCCTGAA ACCCAATGAG
ATGATCAGCC GGAGCCGTGT GAAGCCGGTG TTGGCCAAGG CCGCCGTACA AGCGAAGCCC
CGGCTCGGCT GGAAAGATGG CGCGATGTAC CTGGAAAACA AACAGTTAGG AGAAATATTC
GACTGGATCA GCGACACGTA CGGCATTACC GTGCAATGCA CGCCGGCATT CCGGAATGAA
ACCTTCGCCG GCACCATCCC TACCGACTCC ATTGATTCTT ATTTCCAGAT GATTGAAAAA
CTCTATCAGG TAAAAGCCCG GAAAGACGGC CAAACCTATG TGATAGAATA A
 
Protein sequence
MHQKQLQYLI RRYREGTATR EERELLEMHW KQMLGTDADD GLSESQRSEQ GQDLFQHIIH 
TVQQHEPGSF HPVRSFGRNR WVVMAASLVG ILLIVGAARL WLFRPGPLEY RTAYGERKHI
VLPEGSVVWL NGHSTLRYAP DSLGNRQVWL DGEAQFSVRH TANHNKFVVH MANELNVEVL
GTVFNVVNRH GDVNVVLRSG AVRVVDQSRQ TPDIVLKPNE MISRSRVKPV LAKAAVQAKP
RLGWKDGAMY LENKQLGEIF DWISDTYGIT VQCTPAFRNE TFAGTIPTDS IDSYFQMIEK
LYQVKARKDG QTYVIE