| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0709 |
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| Symbol | |
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| ID | 8224278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 833862 |
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| End bp | 835190 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644928582 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_003085136 |
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| Protein GI | 255034515 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000370496 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.219221 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCAGG CGAACTATAA AATTCCACTC AAATCGTTCG ACACGATTTA CATGCGCGGG
CAGGAAAGCA AAGTCCGCTA CTGGTTCTAC GGAATCATGA TTATCCTCGT GCTGGGGCTT
TTCCTGCCCT GGACGCAGAA TATCAAGGCA CCCGGGTCGC TCACGTCCCT GTATCAGGAG
CAGCGCCCTC AGGACATCAA TTCCCCGATT CCCGGCCGGA TCGCCCGGTG GTTTGTGAAA
GAAGGGGATT TTGTACAAAA AGGCGACACG ATCGTGCAGA TATCGGAGAT CAAGGAAGAC
TACCTCGACC CGAAGCTCGT AAACCGGACG CAGCAACAGG TACAAGCCAA AAAGGACGCG
ATCGAATACT ACAAAGGAAA AGCGGCCACC GCCACGTCGC AGATCCAGGC GTTGCAGGCT
TCGCAAAAGC TGAAAATCCA GCAATTGAAA AACAAACTGG GCCAGCTGGA AAGCAAACTG
GCCAGCGAAC AGGCCGACCT GGAAGCGGCA AACAACGAGT TTAACCTCGC GAAAGACCAG
TACGAGCGTC AGGAAAAAAT GCAGCAGGAA GGGCTCGTGT CCAAAACGCA GCTGCAACAA
CGCAATACGG CATTCAGAAA CGCCATGGCT AAGCGTGTGA CGGCCGAAAA CAAGGTCGCG
CAGACGAAGC AGGAAATCCT CATCACGCAG ATCGAACAGA ACGGCGTGGA GCAGGAATAT
GCCGAGAAGA TCAGCAAGAC GGAAGGCGAG CGGCTTCAAA GCCTCAGCAA CATTGCCTCC
GGCGAGGGTG AGATGGCGAA ACTGGAAAAT CAGGTAACCA ACTACACGAT CCGTAACGGC
ATGTACATCA TCACCGCACC GCAGGACGGG CAGATTGTCC AGGCCAGCAA GGCGGGTATC
GGCGAAATCC TTAAAGACGG CGAGCGCATA ACCGTGATCG TGCCTACCCG CACGCAATAT
GCGGTGGAAA TGTACGTGCG CCCGGTGGAC CTGCCGCTCA TTAGTGTGGG CCAGAAAGTA
CGGTTTCTGT TTGATGGCTT CCCGGCCATT ATATTCAGCG GCTGGCCCGA AAACAGTTAC
GGTACTTTTG GCGGAAAAGT GGTCGCATTT GAGCATACCA TCAGTCCGAA CGGACTTTTC
AGGGTGCTTG TTGCGGAAGA CGCTTCCGAC CGTCCGTGGC CGCAGCAGCT GAAACTCGGC
ACCGGGGCGC AGGGGATCGC ATTGCTCAAA GACGTGCCGG TATGGTACGA GCTTTGGCGG
AATATCAATG GCTTCCCGCC AGACTATTAT GTGTTGAAAG AACCCAAAGC AAAGGAGCAA
AAGAAGTAA
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| Protein sequence | MDQANYKIPL KSFDTIYMRG QESKVRYWFY GIMIILVLGL FLPWTQNIKA PGSLTSLYQE
QRPQDINSPI PGRIARWFVK EGDFVQKGDT IVQISEIKED YLDPKLVNRT QQQVQAKKDA
IEYYKGKAAT ATSQIQALQA SQKLKIQQLK NKLGQLESKL ASEQADLEAA NNEFNLAKDQ
YERQEKMQQE GLVSKTQLQQ RNTAFRNAMA KRVTAENKVA QTKQEILITQ IEQNGVEQEY
AEKISKTEGE RLQSLSNIAS GEGEMAKLEN QVTNYTIRNG MYIITAPQDG QIVQASKAGI
GEILKDGERI TVIVPTRTQY AVEMYVRPVD LPLISVGQKV RFLFDGFPAI IFSGWPENSY
GTFGGKVVAF EHTISPNGLF RVLVAEDASD RPWPQQLKLG TGAQGIALLK DVPVWYELWR
NINGFPPDYY VLKEPKAKEQ KK
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