| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0688 |
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| Symbol | |
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| ID | 8224257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 810912 |
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| End bp | 814265 |
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| Gene Length | 3354 bp |
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| Protein Length | 1117 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644928561 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003085115 |
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| Protein GI | 255034494 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.850484 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAGTT CCGATATCGA TTTATTGAAA GAAAAAACGT CCCGCCGCCG GGGCAAATCG
CTGCTGCGGC GGGTGAATGA ATGGCTGCAT CTGTGGCTGG GGCTGGCGTC GGGGATCATC
GTTTTCGTGG TATGCCTCAC GGGCGCCATC TGGGTTTTTA ATGAAGAAAT CACCTGGCTG
CTCGAACCGG CCATCCGCGC GGAAACCCGC GATGAACCAG TGCTGAAACC ATCACAGATT
CTGGCCATCG CCGACAGCGC ATTCCCCGGA AAGCAGGCTT CCTATGCGTA CCATCAGCAG
GGTACAGCCA TTCGCGTGGG AGTGGGGGAG CACATGCTGT TCCTCGATCC CTATACCGGC
CGCGTGCAGG GTATGGACAG CCACGAAAAG GGCGAAACCG GCTTTTTTGA ATGGCTTTTG
CTCGGGCACC GCTATTTGTG GCTGCCACAG GAAATCGGGC GTCCGGTGGT GAATTACGGG
ACGCTGGTGT TTGTGGTGCT GCTGGTGACG GGGCTTATCT GGTGGTATCC CGCCAAATGG
ACTAAAGGTG CCAGAAAGAG AAGTTTCAAT ATCAAATGGA AAGCAGGCTG GAAGCGCCTC
AATGTGGACC TGCATAATGT GCTGGGCTTT TACACCTTCC TCGTGCTGCT GGTGCTGGCC
GTTACAGGAG TGGTTTTTGG CCTCGCGTGG TTCGGAAAAG GCTTGTACCG GCTCACCTCG
GGCGGCCAGG AAGAGCCCGA ATGGAAGCGC GTGACGTCGG ATACCACACA GCACGGGAAA
TTTTACACCT ATAATGAGGC CCTCGACCAG GTGTGGGCAG GAATGATCGC AAAGTATCCT
TCCAAAGGCG GTTTTTATTA CTCGTTCCCC GATTCCACGC AGGCGCATTC GACCATCAGC
ATGCGTACGT ACCCCGCCGC GGGGCGTTTT TACGACGTTA CCCGCCACAC CTACGACCGG
CACACGCTCC GCCGGCTGAA ATTTTACGAG GTTTTTGATA AAAGTTTCGA AGCATCGTCG
GCCGCCGCTA AAATACGGCG GATGAATTAC GATATGCACA TCGGCACCAT TCTCGGATTG
CCGGGCAAAA TACTGGCATT CATCGCCTCG CTCATCGGTG CGTCGCTGCC CGTGACCGGC
TTCCTCGTGT GGTGGAACCG GCGGGGATTC GGGAAAAAAA TAGGGAGGTA TGGAGCCGCT
GCGATCGTTT TCTCGTTGTG CTGCGGCGGC CAGGCATCTG CCCAGCAGAA ACGCGGCGAT
GCGGCCGCGG ACACCAGCGC ACGTGACCTG CGCGAGCTCA CCGTTACCGG CAAAACAGAG
GCCACCCAGG TGAAGGAGCT CGTGTTCGCG GTGGATGTGC TGGACCTGAA AGCAATGGCG
GGGCGTAACC TGGAAATCAA CCGGTTGCTG GATGCCATGC CGGGTGTGAG GGTGCGCGAA
ACGGGCGGAA TGGGATCGGA ATTCAGCTAT GCCATTCATG GCTTGTCGGG CAAATCGGTC
CGGTTTTTCG TGGACGGTGT GCCTATGGAG GCTTACGGGA CCGGTTACAG CATTCAGAAC
TTCCCCGTCA ATTCCCTCGA ACGGATCGAG GTGTACAAAG GCGTCACGCC GATAGAGCTT
AGCGGGGATG CCTTGGGTGG GTCGGTTAAT CTCGTAACCC GCAAGGATTT GGGCAATTAC
CTGGATGTCT CATACAGCAT CGGTTCGTTT CAAACCCACA AAGCGGAACT GTCGGGCAAA
TGGCGCCAGC AGAATGGCCT CACGCTGCAA CTGGGCAGCT CCTACCGTTT TTCCGAAAAT
AATTACAAAG TATGGGGCCC GACGGTGGAA GTGGCCGACG AGTTCGGTAA GCCGGTTGCG
GGGAGAAAAT ACCGGCGCTT CAACGACGAT TTCAGGGCAT TCAACATCAA GGCGGAGGTG
GGCATTACCG GCAAGCCGTG GGCCGATGCC CTCATGCTGG GGCTGATCGG CTCGGATATG
GACAAGGGCG TGCAAACAGG CCGCACGATG GCGTTCGTGT ACGGCGGGGT GCGGTACGAC
GAGAAGCTGC TCGCGCCATC CATCCGCTAT TCGAAAAAGA ATGCGAACGG CCTCTCGGTG
GACATTTATG GCGTGCTCAA CCGCATGCAG GCGCAAACTA CCGACACCAG CTCGCGGAAA
TACAACTGGG CACAGGCCGT GATAGGCCAG GTGGCCGGCG AACTGAATGG CATCCGGGCA
CAAAAATCGG CCTACCGGTT CAGGGACCGC AATGCGATGG TGATCGCCAA TGCCTCTTAC
GCGCTTGGTG CGCACCATAA AATCGCGGCC AGCTACTCAT TGAACAGCAC ACGCCGTACC
GGCAACGACC CGCTCGCCAC CGCCGAATGG ACGATCCCGT TCCGGGAGCC GCAGGAATTG
AGCAAATATG CGGCGGCGCT GTCGTACCAG ACCGTGTTTT GGGACGACAA ACTAACCAAT
GTGCTTTTTG TCAAAAACTT CGGCTACTCG GCCCGTACCA ATGTGTACAA CTACAACGGC
GGCCAGCAAA AGGAGCTCAT TCCTTACCTG TCGGAAAGCA GTCAATGGGG TGCGGGTGTA
GGCTCAAAAT ACCAGGTGAA TGCGGGGACG CTGGTGAAGC TCTCGTTTGA AAGCACCTCA
CGGATGCCTG ACGGCGTGGA GCTTTTGGGT AACGGAAACA CGATCCTGAA TGCGCCCGGG
CTGAAACCGG AGCGAAGCAG CAACGTCAAC ACGGGCATCT CGCAATCGTT CCGGAACGGG
GATACCAGGT GGGGCTACGA ACTCGGGCTT TTCTACCGGA ACACCCGCGA CCTGATCTGG
CTCGGCGAGG GCGATCTTTA CGGGACGGCC CGTTACGAGA ATATCGACAA GCTGCGTAGC
GCGGGCGCCG ATCTCGCTGT TCGTTACGCG CGCCGGAAGT GGCTGGAAAT CAATGCGGCC
GTTACTTATC AGGATGTGCG GAACCGGCAG CGGTATACGG CTTCGGGAGC TAAAAACATT
GTTTACAACG ACCGGATGAA GAACCTGCCG TCGCTCATGG CCAACGGCGA GGTGCGGTTC
CGGTATGCTT CCGCATTCGG CGGCAGCGGC GACCTGAGTT TCTACGTGGG CACCGACTAC
GTGCAAGGTT TTTTCCTCAG TTGGCCCAGC CTCGGCGACC GCTCCACCAA AAAACGCATT
CCCACCCAAT TCCTCCAAAA TACGGGCATT ACGTACAGTC TGATGCAAAA CAGCCTGAAC
GTGAGCCTCG AATGCCGCAA CCTGTTTGAT CGCCAGGTGT ACGACAACTA CCTGCTTCAA
AAGCCGGGGA GATTTATCAG CTTGAATATC AGATACTTTT TATTTAATCC ATAA
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| Protein sequence | MTSSDIDLLK EKTSRRRGKS LLRRVNEWLH LWLGLASGII VFVVCLTGAI WVFNEEITWL
LEPAIRAETR DEPVLKPSQI LAIADSAFPG KQASYAYHQQ GTAIRVGVGE HMLFLDPYTG
RVQGMDSHEK GETGFFEWLL LGHRYLWLPQ EIGRPVVNYG TLVFVVLLVT GLIWWYPAKW
TKGARKRSFN IKWKAGWKRL NVDLHNVLGF YTFLVLLVLA VTGVVFGLAW FGKGLYRLTS
GGQEEPEWKR VTSDTTQHGK FYTYNEALDQ VWAGMIAKYP SKGGFYYSFP DSTQAHSTIS
MRTYPAAGRF YDVTRHTYDR HTLRRLKFYE VFDKSFEASS AAAKIRRMNY DMHIGTILGL
PGKILAFIAS LIGASLPVTG FLVWWNRRGF GKKIGRYGAA AIVFSLCCGG QASAQQKRGD
AAADTSARDL RELTVTGKTE ATQVKELVFA VDVLDLKAMA GRNLEINRLL DAMPGVRVRE
TGGMGSEFSY AIHGLSGKSV RFFVDGVPME AYGTGYSIQN FPVNSLERIE VYKGVTPIEL
SGDALGGSVN LVTRKDLGNY LDVSYSIGSF QTHKAELSGK WRQQNGLTLQ LGSSYRFSEN
NYKVWGPTVE VADEFGKPVA GRKYRRFNDD FRAFNIKAEV GITGKPWADA LMLGLIGSDM
DKGVQTGRTM AFVYGGVRYD EKLLAPSIRY SKKNANGLSV DIYGVLNRMQ AQTTDTSSRK
YNWAQAVIGQ VAGELNGIRA QKSAYRFRDR NAMVIANASY ALGAHHKIAA SYSLNSTRRT
GNDPLATAEW TIPFREPQEL SKYAAALSYQ TVFWDDKLTN VLFVKNFGYS ARTNVYNYNG
GQQKELIPYL SESSQWGAGV GSKYQVNAGT LVKLSFESTS RMPDGVELLG NGNTILNAPG
LKPERSSNVN TGISQSFRNG DTRWGYELGL FYRNTRDLIW LGEGDLYGTA RYENIDKLRS
AGADLAVRYA RRKWLEINAA VTYQDVRNRQ RYTASGAKNI VYNDRMKNLP SLMANGEVRF
RYASAFGGSG DLSFYVGTDY VQGFFLSWPS LGDRSTKKRI PTQFLQNTGI TYSLMQNSLN
VSLECRNLFD RQVYDNYLLQ KPGRFISLNI RYFLFNP
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