Gene Dfer_0659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0659 
Symbol 
ID8224228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp769362 
End bp770690 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content52% 
IMG OID644928532 
ProductAAA ATPase central domain protein 
Protein accessionYP_003085086 
Protein GI255034465 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0464] ATPases of the AAA+ class 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0372478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTTG CTACAAAAAG TATCCACGTC GCTATCAGCG ATTTTCTGAC ACAACTGATT 
GAAAACCGTT TGAAAAACTA TTCGGCAGAC GACGCGCTGT TTTTTTATGA AAAAGCAAGT
CTGGAAGCCA TCAAATCCTC GCCGGCGATC AGCGGGATTT TTAAGGACTA CACACCCAAA
AATGAAGAAG TGATTATCGT ACTCATTGCA TTGGCCCCCA GCTTTCTGCC GCATTTTTTT
AACTCGCTCA TCAGCCGGTA TTTTCCCGAA GGCGGCGAGT TCGTCGAGTT TGGCGGCGTG
AAGGGCGCCA ACCACCGCGG CATTATCCCT ACCGGCGAAA CGGCGCTTTT CATCCTGGCC
GGCAACGACC TCGACAAGCG CTTCCGCATC CAGCAGCTCC TCGGCAACGA CGCCTACCTG
GCCAAATCCG GGATGCTGCG CGTAGAGGAC ATGAAAGAAG GCGAGCCGAA AATGAGCGGA
AAACTCATCC TGGACGAGGA AACCGTTGAA TACCTGATCT CCGGCCAGGT GTCCAGGCCG
CGGTTTTCGA CCGATTTCGG CGCCGAGTAC GTCAGTACCG CACGCGAATG GGACGACCTT
GTGCTAAGCC CATCCACCAA AAGGCAGATC CGGGATATCG AAATCTGGCT CCGGCACCAC
CACACGCTGA TGGAGGAATG GGGCATGGCG AAGAAAATCA AACCGGGCTA CCGGGCGCTC
TTCCACGGCC CTCCGGGCAC GGGCAAAACG CTCACCGCGA CGCTGATCGG GAAGTATGCA
GAGCGGGATG TTTTCCGAAT CGACCTGTCG AAAATCATCT CGAAGTACAT TGGAGAGACG
GAAAAAAACC TGTCTAAAAT ATTTGATAAA GCGCAAAACA AGGACTGGAT TCTCTTTTTC
GACGAAGCGG ATGCCGTTTT TGGCAAGCGT ACGAACGTCC GCGACGCGCA CGACAAATAT
GCCAACCAGG AAGTATCATT CCTGTTGCAG CGCATCGAGA CTTACCCCGG CGTGGTGATC
CTGGCCAGCA ATCTCAAAAG CAATATGGAC GACGCATTTC TAAGGCGTTT CAACTCCATC
GTATTTTTCC CAAAACCAAC CGCCGACGAG CGATTGCTGC TTTGGCAAAA AGCATTTCCC
AAACAAATCC AAATGGAAGC AGACCTGCCG GAAGTTGCCC GAAAATTTGA CCTTACCGGC
TCGACGATCA TGAATGTCAC GCAAAGGGCC TGCCTTACGG CGCTGCACCA AAACACGACC
ATCATTACAG ACGACCTGCT GTACCAATCG ATCCGGGCGG AATATGAAAA GGAAGGAATT
GCGATTTAA
 
Protein sequence
MSVATKSIHV AISDFLTQLI ENRLKNYSAD DALFFYEKAS LEAIKSSPAI SGIFKDYTPK 
NEEVIIVLIA LAPSFLPHFF NSLISRYFPE GGEFVEFGGV KGANHRGIIP TGETALFILA
GNDLDKRFRI QQLLGNDAYL AKSGMLRVED MKEGEPKMSG KLILDEETVE YLISGQVSRP
RFSTDFGAEY VSTAREWDDL VLSPSTKRQI RDIEIWLRHH HTLMEEWGMA KKIKPGYRAL
FHGPPGTGKT LTATLIGKYA ERDVFRIDLS KIISKYIGET EKNLSKIFDK AQNKDWILFF
DEADAVFGKR TNVRDAHDKY ANQEVSFLLQ RIETYPGVVI LASNLKSNMD DAFLRRFNSI
VFFPKPTADE RLLLWQKAFP KQIQMEADLP EVARKFDLTG STIMNVTQRA CLTALHQNTT
IITDDLLYQS IRAEYEKEGI AI